| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1241 |
|---|
| Symbol | |
|---|
| ID | 3742695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1202995 |
|---|
| End bp | 1205157 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637771421 |
|---|
| Product | glycyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_377249 |
|---|
| Protein GI | 78184814 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.232901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACAA CGTTTCTTCT TGAAATCGGC ACTGAAGAAT TGCCGGCGGA TTTTGCGCGT
CAAGCGCTCG ACCAACTCCG AGAACGGGTT CCGCACGACC TTGCTGAAGC ACGGTTGAGC
CATGGATCGA TTTCGATCTT TGGAACCCCA CGCCGATTGG TGGTGTCGAT CCCCGACTTG
GACGACCGTC AACCCGATCT CCGTGAAGAG CGAAAAGGTC CTCCGGTTGC TCAGGCTTTC
AAAGATGGTG TTCCAGGCCC TGCAGCGATT GGCTTTGCCA AACGCTGCGG CATCGATGCA
TCACAGCTCG AGCAACGCGA TACACCCAAA GGTCCGTGTG TCTTCGCCAC TGTGTTGACG
GCAGGGCGCG ACGGTGTGTC CTTGCTTCGC GAGCTAATCC CAACGTGGAT TGATGCACTG
CAGGGCCGTC GCTTTATGCG ATGGGGAACG GGGACCCAGC GCTTCAGTCG ACCAATTCGT
TGGTTGGTAG CGCTCCATGG CGACGATGTG ATCAATGTGG AGATGCCTGG GGCAGACCCC
GTGGTTCGAA GCGACCGCTA CAGCCGCGGC CATCGTCTCT ATGGCAACCA ACAGTTGTGT
ATTGCGTCGG CGGATCAGTA CGTCAAAACC CTTCAAAAGG CTGGCGTTTT GGTGGATCGC
GACGAACGAT CTCGTCTAAT CCGAGCGTCG ATTGATCAAG GGGCTGAAGC CGCAGAGGGG
GAGGCCAACT GCCCGGACCG ACTTTTTGAA GAACTCGTTG ATCTTGTTGA AGATCCCCGG
GTTTTGCAGG GGCAAATTGC GGAGCGATTT CTGCAATTAC CCCCTGAGGT GATTTCCACC
GTGATGCAAG CGCATCAGCG CTATGTGCCG TTGGAGATTC CAGGACTCGA CCCAGACCCG
TTGCGATTAA CGGCCGAGGC GGTCCTGCGC CCTGAGTTTT TGTTGGTGGC GAATGGCCTT
GAGCAGGCCT CGGCGTTGAT TACCCGGGGG AATGAGCGGG TCTTAGGGGC CCGTCTTGCC
GATGCTGAGT TTTTCCTCGA GGTTGATCGA CGTCAGGCCA GTGCAACGCG TCGTGAGGCT
CTAAGCCGCG TCACGTTTGC CGAGGGGCTT GGCAGTCTTC GTGATCGTTG TGATCGGATT
GAGCGCCTCA CAAACCAGCT CTTAACAGAC CTTGCGCTGT CGGATTCGGT TGCTATGGCG
TCTCGTCGTG CGGCACATCT GTGCAAGCAC GATCTTGTTA GTCAGATGGT GGGTGAATTC
CCTGAACTTC AGGGGTTGAT GGGAGGCAAA TACCTACTGG AGGAAGGCGA ATCGCGCGAT
GTGGCGCTGG CGGTTGTGGA GCACTACTTA CCCCGGGGTG CAGGGGACGA ATTGCCGAGC
ACTGATGCTG GTGCCGTTGT GGCCCTGGCT GAGCGATTTG AGCTGTTACT CAGCATTTTC
GCTAAAGGGG AACGCCCCAC TGGCTCATCC GATCCCTACG CCCTACGTCG GGCGGGCAAC
GGTGTGCTGC TCATTCTTTG GAATCAAGGC TGGAAACTCG ATCTCAATGT CTTTCTTGCC
AAGGCCGTTG AAGCCTGGAG AGAGCTTTTT CCAGCTTTTG CGGTGGACAC AGCCCAACTG
ACCAGCGATC TTTCAGCCTT GTTGCGACAG CGCATTACAT CGCAACTCGA AGACGATGGT
TATGCCGCCG ATTTGGTTCA GGCGGTGGCT GGCGACACCG TTTCGACGAC GCGTCTGTTG
CACGATCCCC TGGATGTGCG GGTTCGTATT CAACTGCTGC ACGGATTGAG AGATCAGGGT
CGATTAACGG CAGTGCAAGC GGTGGTTCAG CGTGCTTCTC GGTTGGCTGA AAAGGGTGAC
CTACCTCTGG ATGTGTTGTC CAGCACTGAA GTGGTGGACC CTTCGCGGTT TGAGTCGGCC
AGTGAGAAGG GGCTGTTCGA TGCCACCGAA CGATTGAACC CCCTCGCTGA ACGTGGTGCC
TATCAAGAAC TCTGTGACGT TCTTGTGGAA TCCACACCGG CACTTGAGGC GTTCTTTGAT
GGTGACCAGA GTGTGATGGT GATGGCCGAT GATCCGGCCC TTCGAATGAA CCGACTCAAT
TTGCTCGGTG TGTTACGCAA TCAAGCAGCT GTCTTTGCTC AATTCGAGTT GATTCAAAGC
TGA
|
|---|
| Protein sequence | MTTTFLLEIG TEELPADFAR QALDQLRERV PHDLAEARLS HGSISIFGTP RRLVVSIPDL
DDRQPDLREE RKGPPVAQAF KDGVPGPAAI GFAKRCGIDA SQLEQRDTPK GPCVFATVLT
AGRDGVSLLR ELIPTWIDAL QGRRFMRWGT GTQRFSRPIR WLVALHGDDV INVEMPGADP
VVRSDRYSRG HRLYGNQQLC IASADQYVKT LQKAGVLVDR DERSRLIRAS IDQGAEAAEG
EANCPDRLFE ELVDLVEDPR VLQGQIAERF LQLPPEVIST VMQAHQRYVP LEIPGLDPDP
LRLTAEAVLR PEFLLVANGL EQASALITRG NERVLGARLA DAEFFLEVDR RQASATRREA
LSRVTFAEGL GSLRDRCDRI ERLTNQLLTD LALSDSVAMA SRRAAHLCKH DLVSQMVGEF
PELQGLMGGK YLLEEGESRD VALAVVEHYL PRGAGDELPS TDAGAVVALA ERFELLLSIF
AKGERPTGSS DPYALRRAGN GVLLILWNQG WKLDLNVFLA KAVEAWRELF PAFAVDTAQL
TSDLSALLRQ RITSQLEDDG YAADLVQAVA GDTVSTTRLL HDPLDVRVRI QLLHGLRDQG
RLTAVQAVVQ RASRLAEKGD LPLDVLSSTE VVDPSRFESA SEKGLFDATE RLNPLAERGA
YQELCDVLVE STPALEAFFD GDQSVMVMAD DPALRMNRLN LLGVLRNQAA VFAQFELIQS
|
|---|
| |