Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1237 |
Symbol | |
ID | 3742691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1197903 |
End bp | 1200458 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637771417 |
Product | putative peptidase U32 family protein |
Protein accession | YP_377245 |
Protein GI | 78184810 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTCTC CTGAGCTGTT GTCTCCAGCT GGCGACTGGG CTGCTCTTAA AGCGGCTGTT GCATCCGGCG CCGACGCGGT CTACTTCGGC GTTGATGCCT TCAACGCAAG ACAGCGCGCC GAAAACTTTC GTTTGGAAGA ACTGCCGCAA ATAATGCATT GGCTGCATCA GCGCGGTGTG CGGGGCTTCC TCACCTTCAA CGTGCTGGTG TTTAGCGATG AGCTGGAGTC GGCGGCCCAG TTGCTCCTTG CCGCAGATCA AGCCGGTGTT GATGCGGTGA TTGTTCAAGA CGTTGGCCTT TGCCGATTAG CCCAACGGTT GGTGCCGCGA TTAACCCTGC ATGGTTCGAC GCAGATGTCG ATCACCAGTG CCGCGGGAGT GGCCCAAGCC GCTGCTTTGG GTTGTGAACG GGTTGTCTTG GCTCGTGAGC TGTCTTTGCA GGATCTTGAG CGGCTTCAAA ATCAGCTCAC CCAGAGGCAT TTGCAAATCC CTTTGGAAGT GTTTGTGCAT GGCGCGTTGT GTGTGGCCTA CTCGGGCCAG TGCCTCACGA GTGAATCGTT GGGGCAACGC AGTGCCAACC GTGGTGAATG CGCCCAAGCC TGCCGCCTTC CCTATGAAAT GGTCGTGGAT GGCACGTCTC ATTCCCTTGA AGATCAGCGT TATTTGCTGT CCCCACAGGA TCTTGCCGCC TGGGAACTGC TTCCTGATTT GCAGCGCATT GGAATCGCCA GTCTCAAGAT TGAGGGTCGC TTAAAAGACG CAACTTATGT CGCGGCAGTG ACGGAGGCTT ACCGCAACCG GCTGGATCAG CAGGAAGACG ACCCTTCCGA GGTGCGAAGA CAATTGGAGC TTGCCTTTTC CCGCGGTTTG TCCACCGGAT GGTTGAGGGG GGTTAACCAC CGTCAATTGG TGCATGGGCG TTGGAGCAAG AAGCGAGGGC CGTTGGTGGG GCAACTTTTG GGCGTTGAGC GGGGGGGATG GCTTCAAATT CGAAGTCGTG AGCGGATTCG GCCAGGCCAA GGCGTTGTTT TGGAGGTGCT GTCGTCTGAT CCGTTAACTC CACCCCGTGA GATTGGAGGC CGTGTGATGG CCTGTGAGCA GATCGGTCGA GAGCGCTTGA AACTTCGTTT AGGACCGCAC CGTCTTGAGA CCGAAGCGCT GAGGGCTGGC GCATCGGTAT GGCTAACAAG CGATCCGGCT TGGCAAGCCC AGTGGCAACG AGCCTCCCGT CGCGTTGTCG AGCCCGTATC CACCCCTTTG GTGGTTGCGG TGGTTGGTGC GGTGGATCAG CCCCTAACGA TTGAGGTCCT GCAACCGAGC ACCGCAGGAC TCAGCGTGAA AAGCGCGATG CCTCTTCAAG TCGCAAGCCA ACGGCCACTG GATCACCAGC GACTGACTGA GCAACTGGGA CGGCTTGGGG GCACGGCTTG GCGGTTAGAG CGCCTTGAGC TTCATCTGGA AGGGGATCTC TTCTTGCCCG TAGCTGAACT GAATCGGATG CGTCGTCAAC TGCTGGATTC GCTTGAAACT CTCGCAGAAG CTGAGGAGGC CCCAACGGCA GATCCTGCGG TGCCTTTGGA CAGTGGGCTG AATGTGCATG ACGTCCTCGT CCCGATGCTC AGCTCCCTGG CGGGCTCTTC CACCCCTGTT AACCCTGTGG ATCTACAGGC GCCAGGTTTG GTGGTGCTCG TGCGCAGTCT TCAGCAGCTC AAGGCCCTTA AGGACTTGCC TACGTCAGTG GCTCCCATTC GATCGGTGGT TGCAGACCTT GAGCATCCGC GTGATTTGCG TGAAGCCGTT GCCATCGCAC GTGGGCATTG GCCAGAAGGG ATTTGGCTCG CCGGTTCCCG TGTCACACGC CCCAATGAAC GGTGGACTTT GGAACCCTTA ATTCGAGCCC GACCCGATGG CTTTCTGGTT CGCAATGCCG ATCAACTGGA AACCTTGTGT CCACTAGCAC CTTGTATCGG TGATTTCTCT TTGAACGTCG CCAATCCCCT GGCGATGTCT TGGTATCGCG AGCATTGGGG TCTGAAACGC CTGACAGCGA GTTACGACCT CAATTTGCAG CAATTGCTTG ATTTGACCTC CCATGTCGAT GCATCGGCGC TGGAAATCAC GCTCCACCAG CACATGCCCT TGTTCCACAT GGAGCACTGC TTGTTTTGCG CCTTCCTTTC CGATGGACAT GACCACACAG ATTGCGGTCG TCCCTGCGAG ACGCACACGG TGACATTGAG GGATCGCAGC GGCGTTGAAC ATCCGCTTCG CGCTGATTTG GGATGCCGCA ACACCCTGTT TAACGGCACG GCCCAGACAG GGGTTGAGTC TCTCCCCGTC TTAAGAAAAG CAGGTGTGAC CTCTTTTCGT CTCGAGTTAT TGGATGAGGA TGCTGAGTCG ACGCTGAGGC GTGTGCATCT TTATGCCGAT GCGTTGGCGG GTCGACTCGC TTCTAAAGAC GTTTGGCGCC AGGAACGGAT CCACAACCAA CTTGGCGTCA CGCGAGGGAG CCTGTTGGTG AAGGGGCCGG AAAAGACCAG TCGCGTCTCA CGTTGA
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Protein sequence | MNSPELLSPA GDWAALKAAV ASGADAVYFG VDAFNARQRA ENFRLEELPQ IMHWLHQRGV RGFLTFNVLV FSDELESAAQ LLLAADQAGV DAVIVQDVGL CRLAQRLVPR LTLHGSTQMS ITSAAGVAQA AALGCERVVL ARELSLQDLE RLQNQLTQRH LQIPLEVFVH GALCVAYSGQ CLTSESLGQR SANRGECAQA CRLPYEMVVD GTSHSLEDQR YLLSPQDLAA WELLPDLQRI GIASLKIEGR LKDATYVAAV TEAYRNRLDQ QEDDPSEVRR QLELAFSRGL STGWLRGVNH RQLVHGRWSK KRGPLVGQLL GVERGGWLQI RSRERIRPGQ GVVLEVLSSD PLTPPREIGG RVMACEQIGR ERLKLRLGPH RLETEALRAG ASVWLTSDPA WQAQWQRASR RVVEPVSTPL VVAVVGAVDQ PLTIEVLQPS TAGLSVKSAM PLQVASQRPL DHQRLTEQLG RLGGTAWRLE RLELHLEGDL FLPVAELNRM RRQLLDSLET LAEAEEAPTA DPAVPLDSGL NVHDVLVPML SSLAGSSTPV NPVDLQAPGL VVLVRSLQQL KALKDLPTSV APIRSVVADL EHPRDLREAV AIARGHWPEG IWLAGSRVTR PNERWTLEPL IRARPDGFLV RNADQLETLC PLAPCIGDFS LNVANPLAMS WYREHWGLKR LTASYDLNLQ QLLDLTSHVD ASALEITLHQ HMPLFHMEHC LFCAFLSDGH DHTDCGRPCE THTVTLRDRS GVEHPLRADL GCRNTLFNGT AQTGVESLPV LRKAGVTSFR LELLDEDAES TLRRVHLYAD ALAGRLASKD VWRQERIHNQ LGVTRGSLLV KGPEKTSRVS R
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