| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1232 |
|---|
| Symbol | |
|---|
| ID | 3742686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1193331 |
|---|
| End bp | 1194485 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637771412 |
|---|
| Product | permease |
|---|
| Protein accession | YP_377240 |
|---|
| Protein GI | 78184805 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAGAA CCTTTAGCCG TTGGATTCAC AAACTATCTC TCCTGGACCG ATGGTTGCTT
GCTGAGATCG CTGCCCCCCT TCTGTTTGCC GTTGCTGCTT TTACGGTGTT GGGGCTCTCC
ATTGGAGTGA TGTTTGAGCT TGCAAGACGT CTTGTTGATG GTTTGCCGAT CTTGGTGGCG
TTACAGCTGC TTCTGCTCAA TATTCCAAGT TTTTTAGTCC TCTCACTACC GATGGCGACC
TTGTTTGCAA CACTGCTTGC TTACAGCAAG TTGTCATCGA ACAGTGAGCT CACGGCACTT
CGTAGCCTTG GTGTATCAAC AATACGCTTG GTTGTTCCCG CGCTTGCTCT ATCGATACTT
TTAACAGGTC TTACTTTTGT TTTTAATGAT GTCATTGTTC CAAGGGCCAA TACCCAGGCT
GAAATAACGT TGCAGCGAGG TCTTGGCCGA GCCCTTGCTA CTGAAAGAGG AAAAGATATT
ACCTTCAATA GTTTTGGCAA AATTTACGAT CCAAAAACTC AAACAAGTTC AACTGGTTTG
CGTCAACTAT TTTATGCAAG ACGTTACGAA GGTGGAGAGA TGTTGGATGT TACACTTCTC
GACTTTTCAC GCGCTGATTA TCGCCAGATG TGGATTGCTG AGCGTGCTGT TTATAACGAA
TCGAAGGCTA TGTGGGAATT CTTTAATGGG CAGGTTCTAA CTCTGAATCC AAACGGAAGT
ACGACCCGGT TAGCATTCGA TGAAAACTTT TATCCTCTAA GCTCCGGCCC TCTTCAAGTC
GCAGAATTGC CAGATGATGC CAATGATATG ACTTTATCTC AAGCAATATC GGCAGAAAAA
GTTGAATCGA ATGCAGGAAA TATTAAAGCG GCCCGAAAGT TAAGAGTCCG CATCCAAGAA
AAATTCTCAT TTCCAATGGC ATGCATCGTC TTTGGTTTGA TTGGCAGCAG TCTTGGTGCA
CGGCCTGGAT CTCGCACCAG TCGAAGTCAG GGATTTGGTG TCAGTATCCT TCTGATTCTT
GGTTATTACG CTCTGAGCGT TAGTTTTAGT TCATTAGGCG TGAGTGGAAT TCTTCCACCG
TTTTTGGCCG CTTGGCTTCC GGTTCTGATC TCCCTTGGAG CTGGTGGCTT GCTTTTGCGC
CAGGCCAGTC GTTAG
|
|---|
| Protein sequence | MIRTFSRWIH KLSLLDRWLL AEIAAPLLFA VAAFTVLGLS IGVMFELARR LVDGLPILVA
LQLLLLNIPS FLVLSLPMAT LFATLLAYSK LSSNSELTAL RSLGVSTIRL VVPALALSIL
LTGLTFVFND VIVPRANTQA EITLQRGLGR ALATERGKDI TFNSFGKIYD PKTQTSSTGL
RQLFYARRYE GGEMLDVTLL DFSRADYRQM WIAERAVYNE SKAMWEFFNG QVLTLNPNGS
TTRLAFDENF YPLSSGPLQV AELPDDANDM TLSQAISAEK VESNAGNIKA ARKLRVRIQE
KFSFPMACIV FGLIGSSLGA RPGSRTSRSQ GFGVSILLIL GYYALSVSFS SLGVSGILPP
FLAAWLPVLI SLGAGGLLLR QASR
|
|---|
| |