Gene Syncc9902_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1219 
Symbol 
ID3741811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1179887 
End bp1180396 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content51% 
IMG OID637771399 
Producthypothetical protein 
Protein accessionYP_377227 
Protein GI78184792 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCTT TCTTCCGCCC AGTCTCAATT CTGGCGGCTG TGTTGATTGT TTTCACCACA 
CTGTTCTGGA CTGATTCTGT CGCCGCGATT ACGGCTCCTG AGTTGCGCGG CAGCAGCTCT
TATCAGGGGA TTACAGAAGA CATGCATGGA ATGGATCTTA AAGAGAAGGA GTTCCTCAAG
GCCAACCTTC GCGATGTGAA CCTCAGCGGT GCTGATCTTC GGGGTGCCGT GATCAACACC
ACTCAATTAC AAGGTGCTGA TTTGCGAGAT GCCAATCTTT CTGATGTGGT GGGTTTTGCA
AGTCGATTTG ACGGTGCCGA TCTGCGTGGG GCTGTTTTAA CCAATGCAAT GTTGATGCAA
AGTCGTTTTA CGGATGCACA AATTGAGGGT GCTGATTTCA CCGATGCAGT GATCGACCTC
CCCCAACAAA GGGCTCTGTG TAGCTCTGCC GATGGTGTGA ACCCTCAGAG TGGGGTCTCT
ACCCGTGAAA GTCTCGGGTG TCGTCCTTGA
 
Protein sequence
MQAFFRPVSI LAAVLIVFTT LFWTDSVAAI TAPELRGSSS YQGITEDMHG MDLKEKEFLK 
ANLRDVNLSG ADLRGAVINT TQLQGADLRD ANLSDVVGFA SRFDGADLRG AVLTNAMLMQ
SRFTDAQIEG ADFTDAVIDL PQQRALCSSA DGVNPQSGVS TRESLGCRP