| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1152 |
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| Symbol | |
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| ID | 3742802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1119553 |
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| End bp | 1121352 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637771332 |
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| Product | peptidase M41, FtsH |
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| Protein accession | YP_377160 |
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| Protein GI | 78184725 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCCAG GTTCGACGCA GTCATCGGAT TCACCCGCGA ACCAGCAGGT GACACAACCG
TTCTTCCAAA AATTATGGAA GAAAGAGGAA GGCGTCAGCT ATTCGACGCT GCTCAGGGAT
ATCGACAACA AAAAAATTAA GCAATTAGAT CTCGTCCCAG CGCGACGGGA AGTTCGAGTT
GTGTACGACG ACGGACGCAA AGTGAGCGTT CCGATTTTTC CGAATGACGA CCGCATCCTG
CGTGCCGCTG AAAGCTCTGA TACACCCTTA ACGGTGGTGG ATGGTCGGCG CGAACAGGCG
AATAAAGATC TCGCCGGCAC CCTGTTGGTG GTGCTGCTTG TGGTGATCGG TTTGTCGTTA
TTGCTGCGTC GTTCAGCCCA AATGGCAAAC CGCGCCCTTG GGTTTGGTCG CAGCAAACCA
CGGTTAAAAC CGCAGGAAGA CCTGCAAGTT CGTTTCGAAG ACGTGGAAGG CATCAATGAT
GCCCGTCAAG AATTAGAGGA AGTGGTGACC TTCCTCAAGC AACCAGAAAC ATTTATTCGG
CTAGGGGCAA AGATTCCCCG GGGAGTGTTG TTGGTCGGTC CACCGGGCAC TGGCAAAACG
TTATTGGCCA AAGCCATCGC CTGTGAGGCT GGGGTTCCGT TTTTCTCGAT GGCAGCCTCT
GAATTTGTTG AGATGTTCGT AGGTGTCGGT GCCAGTCGGG TTCGCGATTT ATTCCGTCAG
GCCAAAGAGA AGGCTCCATG CATTGTTTTT ATTGATGAGA TCGACGCCGT TGGTCGTCAA
CGGGGAGCCG GAATCGGTGG AGGAAACGAT GAACGGGAAC AAACCTTGAA CCAACTCCTA
ACGGAGATGG ATGGCTTCGA GGAAAACTCG GGGGTCATTC TTTTAGCTGC AACCAACCGT
GCTGATGTCC TGGATGCTGC TCTAACGCGG CCTGGTCGAT TTGATCGAAG GATCGATGTG
GGTCTCCCAG ATCGACGGGG ACGCGCGGCC ATTCTTGCTG TGCATGCCAG AAGTCGCCCC
CTTGCCCTGG CGGTGAATTT GGAGGAATGG GCGAGTCGCA CCCCTGGCTT TTCAGGTGCC
GACTTAGCCA ATTTGTTGAA CGAAGCGGCC ATTCTCGCCG CCCGGCACAA CAGCACTGAA
ATTGACGACA GCTGCCTAGA GGGCGCTCTC GAACGCATCA CCATGGGATT GAGCAATCGT
CCCTTGCAAG ACAACGCCAA AAAGCGATTA ATTGCCTACC ACGAGATCGG TCATGCCCTC
GTGGCAACGC TTCTTCCGGC TGCCAATGAC GTGGACAAAG TGACCCTTCT CCCGCGTGGT
GGAGCCGGCG GATACACCCG ATTTATGCCC GATGAAGAAC AATTGGATTC GGGTTTAGTG
ACCCGATCGT CTTGCATGGC CGACTTAGTG GTGGCCCTTG GCGGCCGAGC TGCAGAACAG
GTGGTGTTCG GCCCGTTGGA AGTGACCCAA GGTGCCAGTG GCGATTTACA AATGGTGGCC
CAACTCTCCC GAGAAATGGT CACTCGGTTT GGCTTCTCTA GCCTCGGCCC ACTAGCGCTA
GAAGGAGCTG GATCAGAGGT GTTCTTGGGA CGTGATTGGT TCAGTCAACG GCCCGGTTAT
GCCGAAACAA CTGGTCAAGC AATCGATGGA CAAATTCGAA CTTTGGCCAA AAACGCCTTG
GCTCATGCTG TGTCGTTGTT GGAATCAAAG CGTGAGTTGA TGGATCAGCT CGTAGAAGCG
TTGATCGAAG AGGAAACATT GAGCGGGGAG CGGTTTCGGA GCCTGGCTGA ACTGAACTGA
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| Protein sequence | MAPGSTQSSD SPANQQVTQP FFQKLWKKEE GVSYSTLLRD IDNKKIKQLD LVPARREVRV
VYDDGRKVSV PIFPNDDRIL RAAESSDTPL TVVDGRREQA NKDLAGTLLV VLLVVIGLSL
LLRRSAQMAN RALGFGRSKP RLKPQEDLQV RFEDVEGIND ARQELEEVVT FLKQPETFIR
LGAKIPRGVL LVGPPGTGKT LLAKAIACEA GVPFFSMAAS EFVEMFVGVG ASRVRDLFRQ
AKEKAPCIVF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL TEMDGFEENS GVILLAATNR
ADVLDAALTR PGRFDRRIDV GLPDRRGRAA ILAVHARSRP LALAVNLEEW ASRTPGFSGA
DLANLLNEAA ILAARHNSTE IDDSCLEGAL ERITMGLSNR PLQDNAKKRL IAYHEIGHAL
VATLLPAAND VDKVTLLPRG GAGGYTRFMP DEEQLDSGLV TRSSCMADLV VALGGRAAEQ
VVFGPLEVTQ GASGDLQMVA QLSREMVTRF GFSSLGPLAL EGAGSEVFLG RDWFSQRPGY
AETTGQAIDG QIRTLAKNAL AHAVSLLESK RELMDQLVEA LIEEETLSGE RFRSLAELN
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