| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1040 |
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| Symbol | |
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| ID | 3743195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1005424 |
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| End bp | 1007088 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771214 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_377048 |
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| Protein GI | 78184613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.081093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCCT TTCAGGCCCT ATTCCAACAG CTCGACCAAG TCACAGGAAC ACGGGCCAAA
GTTGGTTTGC TTGTTGAACA TTTCCGTTCT GTACCAGCAG CCGATGCCGC CTGGGCTCTT
GTTCTTCTGT TGGGGAAACG AAGACGCCGG CTCATCACTG GCCGAAGGCT TCGCACGATC
CTTGAGCAAC GGGGTGGCAT TCCAGAGTGG CTAGTTGCCG AGTGTCACGG TCAAGTTGGC
GATTCAGCCG AAACAATCAC CCTGCTTTGG CCAGCCGTGA GCACCAAAAT CGGCCTTGTG
GAATCAAATC TCCCGACACT TCCAGTCGAT CAACCGCTGC ACTGGTGGAT GGACACCCTT
CTTCCAACGA TTAGCGGTTT CAAAGACGAC AACGAAGCAA ACGCTGTTCT CGATCTATGG
CAGAGAGTGC CAAACGACCA ACACTTTGTG GTTAATAAAC TGATCACGGG AGGATTTCGG
GTCGGTGTAT CAACGGGGTT GATCAGTCGA GCAATTGCTG AGGCCTTTGA TCTCGACATC
GAACTGGTTG TCCAACGGTT AATGGGCGGC TTTGAGCCAA CGGCTGACAA TTTTCAACAA
CTCATCCTTC CTGCTAACGA CGATGAACAA CGATCGAAAG GCACTCCGTA TCCTTTCTTT
CTGGCTAGCC CCATCGATCT CCATCGACTT CAAGACAGCA AGCCTGATGA CTGGCTTGTC
GAATGGAAAT GGGATGGCAT TCGTGGGCAA TTAATTCACC GAGGACATGG CACATTTCTG
TGGAGTCGGG GAGAGGAACT CGTGAACGAT AGTTTTCCGG AACTTATCTC GATTGGGGAG
GCTCTACCGG ATGGCACCGT TCTCGATGGA GAAGTGATCT GTTGGAAGGA AGAGGATTCA
ATACCACTAG GTTTCGACCA ATTACAACGC CGCCTGGGTC GAAAACAGGT GGGCAACATT
TTGAAACGGG AATGCCCAGT GCGTTTTATC GCTTACGACC TGTTAGAGCA CAAAGGACAA
GACATCCGAC AAGAGCCAAT TTCACAACGG CAGCAAAAGC TACTTGAAGT GATCAGGACG
CTGAAACATC CAGAGCACTG GCGATTACAA CAAAGCCAGC ACTGGCCACT AAAAACATGG
GACGAGCTCG ATCGGCAACG ACAGGAAGCA AGAAAAAAAC ATGCTGAGGG ATTGATGCTC
AAGCAACGCA CATCCCCATA TTTGGCTGGT CGAAAACGCG GTAGCTGGTG GAAATACAAG
CTTGATCCCA TGAACCTAGA TGCCGTTCTT CTCTACGCGC AGGCAGGACG TGGTCGGCGC
GCGAATTTAT TTACCGACTA CACATTTGGC CTTTGGAACA ATTCAGAAAC ACCTGAACTA
GTCACCTTCG CAAAGGCTTA CTCCGGACTT GACAACGCGG AAATCCTTGA GCTCGATCGT
TGGATCAGAA AGAACACACT GCAACGATTT GGCCCGACGC GATCTGTTCG GCCCGAGCAA
GTCTTTGAAC TGGGGTTTGA AGGAATTCAC CCATCAAAAC GGCACAAAGC TGGAGTAGCC
GTACGATTTC CGAGAATTTT GCGCTGGCGA AAGGATAAGA CTGCCCAAGA AGGAAACTGC
TTAAGCGATG CAAAACAGTT GATGAACGAC CAGAGAGAGG CTTAA
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| Protein sequence | MQAFQALFQQ LDQVTGTRAK VGLLVEHFRS VPAADAAWAL VLLLGKRRRR LITGRRLRTI
LEQRGGIPEW LVAECHGQVG DSAETITLLW PAVSTKIGLV ESNLPTLPVD QPLHWWMDTL
LPTISGFKDD NEANAVLDLW QRVPNDQHFV VNKLITGGFR VGVSTGLISR AIAEAFDLDI
ELVVQRLMGG FEPTADNFQQ LILPANDDEQ RSKGTPYPFF LASPIDLHRL QDSKPDDWLV
EWKWDGIRGQ LIHRGHGTFL WSRGEELVND SFPELISIGE ALPDGTVLDG EVICWKEEDS
IPLGFDQLQR RLGRKQVGNI LKRECPVRFI AYDLLEHKGQ DIRQEPISQR QQKLLEVIRT
LKHPEHWRLQ QSQHWPLKTW DELDRQRQEA RKKHAEGLML KQRTSPYLAG RKRGSWWKYK
LDPMNLDAVL LYAQAGRGRR ANLFTDYTFG LWNNSETPEL VTFAKAYSGL DNAEILELDR
WIRKNTLQRF GPTRSVRPEQ VFELGFEGIH PSKRHKAGVA VRFPRILRWR KDKTAQEGNC
LSDAKQLMND QREA
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