Gene Syncc9902_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1009 
Symbol 
ID3742717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp984000 
End bp984653 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID637771183 
Productendonuclease III/Nth 
Protein accessionYP_377017 
Protein GI78184582 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.544458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCAAAG CAGAGCGGGC TCAGCTTGTT TTGGAGCGAC TTAATCAGCA CTACCCCGAA 
ACACCCATCC CCCTAGACCA CTCCGATCCG TTCACCCTTC TGATCGCAGT TCTCCTGAGT 
GCTCAGTGCA CAGACAAAAA GGTGAATGAA GTCACACCAG CACTCTTTGC TGCAGGGCCA 
ACGCCACAGG CGATGGCAGC TCTCGATGAA ACAGAAATTT TGAGCTTCAT CCGTCAACTC 
GGTTTGGCAA AAACGAAGGC CAAACACGTT CGCCGGCTCT CTGAACTGTT AATCAGTGAG 
CATGACGGGG CTGTTCCCAA CAGCTTCAGG GCCCTCGAAG CACTCCCAGG AGTGGGGCAC 
AAAACGGCGA GCGTTGTGAT GTCCCAGGCC TTTGGTGTCC CTGCCTTTCC CGTCGATACT 
CACATCCACC GCCTTGCCCA ACGCTGGGGG TTGAGCAATG GTTCGTCCGT TTCCACCACA 
GAACAAGACC TCAAACGACT CTTTCCCAAA AGCCACTGGA ATCGACTTCA CCTGCAAATC 
ATTTTTTACG GCAGGGAGTA CTGCTCAGCA CGGGGATGTA ATGGAACGAT TTGCCCTCTC 
TGCAAAGAAC TCTTCCCCAA GCGACGAAAA GCAGTAATCA CGCAGAAAGC GTGA
 
Protein sequence
MRKAERAQLV LERLNQHYPE TPIPLDHSDP FTLLIAVLLS AQCTDKKVNE VTPALFAAGP 
TPQAMAALDE TEILSFIRQL GLAKTKAKHV RRLSELLISE HDGAVPNSFR ALEALPGVGH 
KTASVVMSQA FGVPAFPVDT HIHRLAQRWG LSNGSSVSTT EQDLKRLFPK SHWNRLHLQI 
IFYGREYCSA RGCNGTICPL CKELFPKRRK AVITQKA