| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0766 |
|---|
| Symbol | |
|---|
| ID | 3743120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 779356 |
|---|
| End bp | 780429 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637770941 |
|---|
| Product | ionotropic glutamate receptor |
|---|
| Protein accession | YP_376778 |
|---|
| Protein GI | 78184343 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGGT TCCGACAAAA ATCAGCCGTT GTGCTGGTTG TCCTCCTGCT AGCGGGACTC
CCAGCGCAGG CACGCAAATT AAAAGTAGGC ATCACCGGTT CCCCACCGTT TGTAATTGAG
GAGAACAACT CCTTCCAAGG CATCAGCCTT GATGTTTGGC GACAGGTCGC GGAAGACAAC
GAGCTGGTTT ACGACCTCGT GCCGCAGAGC TCGCCGGAGG CCGGCATCGC GGCGGTCGAC
CAGGGACAGA TCGATGTGTT GGTCGGGCCG ATCAGCATCA CCCCTCGCCG TTTGGCCATG
CCAGGAGTCG ATTTCACTCA GCCCTACTAC CTCGCCAAGT CCGGGGTCTT GCTCCCCCTC
GATTCACCCA CGATCTTTAG CCGGGTGAAG GTGTTCTTTG GCTGGGCCGT GATCTCTTCG
ATCTTGGTGC TCATCAGCGT ATTGCTGGTG GTGGGCAGTT TGATTTGGTT AGCCGAACGT
CGCGAAAATA GTGAGCAGTT TCCGAAACGC TGGCTGCCAG GGATTGCCAG CGGAATGTGG
TTTGCCGTCG TCACCCTCAC CACCGTGGGT TATGGAGACA AAGCCCCCAT CAGTCGAACA
GGCCGAGGCA TTACGGCCAC ATGGATGGTG ATCTCTTTGA TTGCCGTGTC GTCGTTAACC
GCAAGCCTGG CCTCAGCATT CACCTTGTTT TTCTCCGGAG CGAGAGAAAC AATCATCCGT
TCACCCGCTC AACTGCAACA ACGTCGCGTG GCCACCATTG AAGGGACCAG TGGGGTGGAG
TTGGCGGAAC GAGGCAGCAT GCGCGTTCTC AAAACTGAGA ACCTCACCAG CGGCATTGAA
TTGGTGTTGT CGGAACAAGC AGAAGCAGTG ATTTTTGATC GGCCGGCCAT GCGGCATCAC
ATCAAACAAA ATCCTCACTT GGCTGTTCAG CTGGCACCCT TCACGCTTGC GGAGGAAACC
TATGGGTTTG TGTTTAAGAC AGGGAATCCC CTAAGGAATC CCATGAACGT GTCGATCCTG
CGACTGCAGC GCTTGGGCGA AATCAAATCC ATCGCGAACA AACTCTTGAA CTAA
|
|---|
| Protein sequence | MRRFRQKSAV VLVVLLLAGL PAQARKLKVG ITGSPPFVIE ENNSFQGISL DVWRQVAEDN
ELVYDLVPQS SPEAGIAAVD QGQIDVLVGP ISITPRRLAM PGVDFTQPYY LAKSGVLLPL
DSPTIFSRVK VFFGWAVISS ILVLISVLLV VGSLIWLAER RENSEQFPKR WLPGIASGMW
FAVVTLTTVG YGDKAPISRT GRGITATWMV ISLIAVSSLT ASLASAFTLF FSGARETIIR
SPAQLQQRRV ATIEGTSGVE LAERGSMRVL KTENLTSGIE LVLSEQAEAV IFDRPAMRHH
IKQNPHLAVQ LAPFTLAEET YGFVFKTGNP LRNPMNVSIL RLQRLGEIKS IANKLLN
|
|---|
| |