| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0739 |
|---|
| Symbol | |
|---|
| ID | 3743866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 755753 |
|---|
| End bp | 756643 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770914 |
|---|
| Product | geranylgeranyl pyrophosphate synthase |
|---|
| Protein accession | YP_376751 |
|---|
| Protein GI | 78184316 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.396283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG AGTTCGATTT CAAGGCCTAT CTCGGCAAGG CCAAGGACAC CGTTGAAGCA
GCGCTTGACG ACTCCCTCGG ACCTGAACGG CCCGAGTCGT TGCGGGATGC CATGCGTTAT
TCGCTTTTGG CAGGTGGCAA GCGTCTGCGC CCGATTCTTT GCCTTGCGGC CTGTGAATTG
GCGGGTGGTG AAGCGAAGCA TGCGGTGCCA ACGGCGGTCG CCCTCGAGAT GATTCACACC
ATGTCGCTGA TCCACGACGA TCTGCCGGCG ATGGACGACG ACGATGTGCG CCGGGGGCGT
CCCACCAATC ACAAGGTGTA TGGGGAAGCC GTGGCGATCT TGGCCGGTGA TGCGCTGCTG
ACCCGCGCCT TCGAAATGGT GGCTTTGCGC AGCCCGGGAG TTCCAGCGGA GCGGCTGCTC
AAGGTGGTGG GTGAACTCTC ACTGGTGGCC GGAGCACCGG GACTGGTGGG GGGCCAGGTG
GTGGATTTAG AGAGTGAAGG GAAGCAGGTG GATCTCGAGA CACTCGAGTA CATCCATCTC
CATAAAACCG GTGCGCTGCT TAGTGCCTGT GTGATCACCG GTGCGTTGAT TGGCAATGCA
GACGACACCT TGATCACGGC GCTGCGCACC TATGCCCGCG GCATTGGGTT GGCGTTTCAG
ATCATTGACG ACATCCTCGA CATCACGGCG AGCAGTGAGG TGCTCGGTAA AACCGCCGGC
AAGGACCTGC TGGCCGATAA GACCACTTAC CCCAAGCTCT TGGGTTTAGA GGAGTCGAGG
AAGCGGGCGG ATGATTTGGT GCGAGAGGCG AAGGAAGCTC TGCAACCCTG GTCAGAGCAA
GCGATGCCTC TCCTGGCCTT GGCCGACTTC ATCACCAGCC GCGATCGATG A
|
|---|
| Protein sequence | MTAEFDFKAY LGKAKDTVEA ALDDSLGPER PESLRDAMRY SLLAGGKRLR PILCLAACEL
AGGEAKHAVP TAVALEMIHT MSLIHDDLPA MDDDDVRRGR PTNHKVYGEA VAILAGDALL
TRAFEMVALR SPGVPAERLL KVVGELSLVA GAPGLVGGQV VDLESEGKQV DLETLEYIHL
HKTGALLSAC VITGALIGNA DDTLITALRT YARGIGLAFQ IIDDILDITA SSEVLGKTAG
KDLLADKTTY PKLLGLEESR KRADDLVREA KEALQPWSEQ AMPLLALADF ITSRDR
|
|---|
| |