| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0694 |
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| Symbol | |
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| ID | 3743977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 704423 |
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| End bp | 705676 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770867 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_376706 |
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| Protein GI | 78184271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.459164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGGA ATCTACCGGC CGACGGCGAG ACTGTTGTTA ACTTTTGTGC GCTCATGCCG
CAGTCCCAGC GACGAACCCG CACAACCTTG TCCACCCCCT CTTCCTCGTC GGCGCCGACC
AGCTCTCCTG ACGGGATGTC CAGAGCGTCA GCCTCTCGCT GGCGTCCGAG CCAAAAAACC
ATCGCAATTG CCCTACTCGC CCTTCTAGGC GGAGGGTTGC TGCTGGCAAG GTTTGCTCCC
TGGAATCCAA AACGAGACCT CACGCCCTAC ACCACAACCG CAGAACGAGG TGCCCTGTCC
GGAGTCGTTA CCGCCAGCGG CGAACTGCAA GCCATCCAAA AGGTGAACGT GAGCCCCCGC
CAGCAGGGGC TTCTCCAGAA ATTGCTCGTG GATGAAGGCG ATGTTGTGAA GGCGAACCAG
ATTTTGGCGG TGATGGATCG CGGTGATCTT GATGACCGTC TTCAAGAACG TGAGGCCCTG
CTTCAACAAG CCAAAGCCCA ATACACAATC AAAAAACAGG AATACGAGCG CCGCAACAAG
CTGTTCGAGA TGGCAGTGAT CAGCGCTGAC GACTTCAGCA CCGTTCAAAA CGAGATGCTG
GCGCGTCAGG CGGCGATGAC GGCAGCACAA GAACGGGTCG AGCAGCTCGA GCAAACAAAA
CGAGAGCTGG ATATTCGCGC TCCCTTCGCC GGAATGATCA CGGCCCGATA CGCAGAGCCA
GGGGCGTTTG TCACCCCCAC CACTGCAGCT TCAGCCACCG CTGGTGCCAC CAGTTCTTCG
ATCGTGGAGC TCTCCCAGGG ATTAGAGGTT TCGGCTCGCG TTCCCGAAAG CGACATCGGA
CGCATCGCGA TCGGCCAGGC CGCACAAATC CGAGTGGACG CCTTTCCCGA TGAGCGCTTC
CAAGCCCGGG TCAGCGAGAT CGCTCCGAGG GCTGTGAAAC AGGAGAACGT GATCTCGTTC
GAGGTGAAAC TTGCGCTCAT GAATCCCCCC AAAAAATTGC TGATCGGGAT GACCACCGAC
GTGGACTTTC AAACAGGCCG CAGCGCCGTC AAGACCCTCG TCCCCACCGT GGCGATCGTG
ACGGAAGGCG GCAAAACAGG GGTGCTTGTG GTGGATCAAC AGCAACAGCC GGTCTTCCAG
GAGGTGGAAC TCGGCAGCAG CAGTGATGCA CAGACTGCAA TTCTGGAGGG GCTTGATGCG
GGAACGCGCT TCTTCATCGA CCTGCCTCCC TGGGCCAATC GAAACCGCGA TTAA
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| Protein sequence | MGRNLPADGE TVVNFCALMP QSQRRTRTTL STPSSSSAPT SSPDGMSRAS ASRWRPSQKT
IAIALLALLG GGLLLARFAP WNPKRDLTPY TTTAERGALS GVVTASGELQ AIQKVNVSPR
QQGLLQKLLV DEGDVVKANQ ILAVMDRGDL DDRLQEREAL LQQAKAQYTI KKQEYERRNK
LFEMAVISAD DFSTVQNEML ARQAAMTAAQ ERVEQLEQTK RELDIRAPFA GMITARYAEP
GAFVTPTTAA SATAGATSSS IVELSQGLEV SARVPESDIG RIAIGQAAQI RVDAFPDERF
QARVSEIAPR AVKQENVISF EVKLALMNPP KKLLIGMTTD VDFQTGRSAV KTLVPTVAIV
TEGGKTGVLV VDQQQQPVFQ EVELGSSSDA QTAILEGLDA GTRFFIDLPP WANRNRD
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