| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0625 |
|---|
| Symbol | |
|---|
| ID | 3742628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 632884 |
|---|
| End bp | 633819 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637770796 |
|---|
| Product | sodium/bile acid cotransporter family protein |
|---|
| Protein accession | YP_376637 |
|---|
| Protein GI | 78184202 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.667593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCG AGCGTTTCAC CCTTCTGTTT CCTCTTTGGA CCTTGATGGG GGCGGGGTTG
GCCCTGCTCT ACCCGCCACT TTTTACGTGG TTTAGGGGTG ATCTGATCAC CATGGGCCTT
GGGGTGATCA TGTTGGGGAT GGGGCTTGGA CTGACGCCTC AAGATTTTGT ACGGGTTGGG
CAGCGTCCCC GTCCTGTGGT GATTGGGGTG CTGACGCAGT TCATTGTGAT GCCATCGATT
GCAGCCCTAT TGGCCTTTGC GTTGCACCTC TCGCCGCCCT TGGCGGTGGG CTTGATTTTG
GTGGGCTGTT GTCCAGGTGG AACGGCAAGC AATGTTGTGG CATTGATTGG TCGTGCCGAT
GTGGCTTTAT CCGTGGTGAT GACCACGGTG AGCACGCTGG TGGCGGTGGT CCTCACACCC
CAACTCACAG CGTTGTTGGC CAGTCAGTAC GTACCCATTG ATGGTGGGTT GTTGCTGATC
AAAGTTCTGC AAGTGGTGCT GTTCCCCGTG GCATTGGGTG TTCTGCTCAA GCAGGGGCTG
CCGCGGTTAG CGAGTCGAGT GGAGCCAGTG ATGGCTCCTT TGGCTGTGCT TGCCATCGTG
ATGATCGTGG CGAGCATTGT TGGCAGCCAA GCCAACGTGC TGCAACAGCA GGGGGCAAGG
TTGTTCTTGG CCTGTGTACT GCTGCATGGC GCTGGGTTTC TGCTGGGTTG GTTGGTGCCC
CTTTTGGTAG GTGAAGGGGT TCTCGTTCAA CGCACCATCA GCATTGAAGT GGGCATGCAG
AATTCGGGCT TGGCAGTGGT GCTAGCCCGT AGCGGTGGAT TTTCCAGCCC AATCACTGCG
CTTCCCGGGG CTATTTCGGC GGTGATTCAT TGCCTAATAG GTAGTGCGTT GGCGGCCCTC
TGGCGTCAGA AAAGCCGTCA ACAATCCAAG GCCTAA
|
|---|
| Protein sequence | MNSERFTLLF PLWTLMGAGL ALLYPPLFTW FRGDLITMGL GVIMLGMGLG LTPQDFVRVG
QRPRPVVIGV LTQFIVMPSI AALLAFALHL SPPLAVGLIL VGCCPGGTAS NVVALIGRAD
VALSVVMTTV STLVAVVLTP QLTALLASQY VPIDGGLLLI KVLQVVLFPV ALGVLLKQGL
PRLASRVEPV MAPLAVLAIV MIVASIVGSQ ANVLQQQGAR LFLACVLLHG AGFLLGWLVP
LLVGEGVLVQ RTISIEVGMQ NSGLAVVLAR SGGFSSPITA LPGAISAVIH CLIGSALAAL
WRQKSRQQSK A
|
|---|
| |