| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0553 |
|---|
| Symbol | |
|---|
| ID | 3743102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 560152 |
|---|
| End bp | 560904 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637770724 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_376565 |
|---|
| Protein GI | 78184130 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG ATCACGGACC GCTTTTGTAC GAAGGCAAGG CCAAGCGGGT TTTCGCTTTG
GCAGAAACCG ACCGGGTTTT GGTCGAATTC AAAAATGATG CAACGGCCTT TAATGCCCAG
AAGAAGGCTC AGTTAGACGA CAAAGGCCGC CTCAATTGTC AGATCTCCGC CCGTTTATTC
GAGTTGCTTG AGCAGCACGA TGTGCCGACG CATTACTGCG GATTGGTGGA TGACACCTGG
ATGCAAGTGC GGCGGGTTGA GATCATTCCG CTGGAAGTGG TTCTTCGCAA TGTGGCGACG
GGTTCCCTTT GTCGACAGAC GCCGATCGCC GAGGGCACAG GGCTGAATCC AGCTTTGTTT
GATCTCTATT ACAAGGATGA TGCGCTGGGA GATCCTCTGC TGACCGAGGC CAGGGTGCAG
CTGTTGGGGG TGGTGAAGGC GGACCGTCTG TCAGCAATTG AACAACTGGC CCGTCGTGTG
AATGAGATTC TCTGCCCATT TTTTGCTGCT ATCGACCTTC AATTGATCGA TTTCAAGCTC
GAATTTGGGG TGACATCGGG GGGAGAGTTA TTGCTGGCTG ATGAGATCAG CCCAGACACC
TGCCGACTTT GGGACCGCCG AAGCTCCGAT GTGAATGATC GAATTTTGGA TAAAGATCGA
TTCCGTAAGG ATCTTGGCGG TGTAATGGAG GCCTACGGGG AGGTCTTTAA ACGGGTCCAA
TCCCAATGCC CGAACCCACG CAACTGCCTG TAA
|
|---|
| Protein sequence | MTPDHGPLLY EGKAKRVFAL AETDRVLVEF KNDATAFNAQ KKAQLDDKGR LNCQISARLF
ELLEQHDVPT HYCGLVDDTW MQVRRVEIIP LEVVLRNVAT GSLCRQTPIA EGTGLNPALF
DLYYKDDALG DPLLTEARVQ LLGVVKADRL SAIEQLARRV NEILCPFFAA IDLQLIDFKL
EFGVTSGGEL LLADEISPDT CRLWDRRSSD VNDRILDKDR FRKDLGGVME AYGEVFKRVQ
SQCPNPRNCL
|
|---|
| |