Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0488 |
Symbol | |
ID | 3742500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 502670 |
End bp | 504190 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637770659 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_376500 |
Protein GI | 78184065 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.294002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCCA TCCGTCCCGA CGAGATCAGC GCCATCCTCA AACAGCAGAT TGAGGATTAC GACAAGTCAG TTTCCGTCAG CAATGTCGGT TCCGTTCTGC AGGTGGGTGA TGGAATCGCC CGTGTTTATG GCCTCCAACA GGCCATGGCA GGTGAGCTTC TCGAATTTGA AGACGGCACC GAAGGGATCG CTCTGAACCT CGAAGACGAC AACGTCGGCG CGGTGTTGAT GGGTGAAGGC CTTGGTATTC AGGAAGGCAG CACGGTCAAA GCCACCGGCA AGATTGCTTC CGTCCCCGTG GGCGACGCCA TGTTGGGGCG CGTGATCAAC TCCCTCGGAC GTCCGATCGA TGGCAAAGGC GACATCGCTG CCTCGGAGAC GCGGCTGATC GAATCGATGG CCCCTGGCAT CATTCAACGG AAATCGGTGC ATGAGCCGAT GCAGACCGGC ATCACCGCGA TCGACGCAAT GATTCCTGTG GGTCGCGGCC AACGGGAGCT GATCATTGGT GACCGCCAGA CCGGCAAAAC CGCCATCGCG ATCGACACGA TCCTGAACCA AGCAGATCAG GACATGATCT GCGTCTACGT GGCCATTGGC CAAAAGGCTG CGTCCGTAGC CAACGTCGTT GAAGTCCTGC GTGAGCGCGG CGCCCTCGGC TACACCGTGA TTGTTGCCGC TAGCGCTTCA GAGCCAGCAG CACTTCAGTA CTTGGCTCCA TATACCGGTG CTTCGATCGC TGAGTACTTC ATGTACAAGG GCAAAGCAAC CTTGGTGATC TACGACGATC TCTCCAAGCA GGCGGCTGCC TACCGCCAGA TGTCCTTGCT GCTGCGCCGT CCGCCCGGTC GTGAGGCCTA TCCCGGTGAT GTTTTCTATT GCCACAGCCG TTTGCTTGAG CGTGCAGCCA AGCTGTCCGA CGCGATGGGC AAAGGTTCGA TGACAGCGCT GCCCATCATC GAAACCCAAG CCGGTGACGT TTCCGCCTAC ATCCCTACCA ACGTGATTTC GATCACGGAT GGTCAGATCT TCCTCAGCTC AGACCTGTTC AACTCCGGCC TTCGCCCTGC GATCAACGTG GGTATTTCCG TGAGTCGTGT TGGTGGTGCT GCGCAAACCA AGGCGATCAA AAAAATTGCT GGCACCTTGA AGCTGGAGTT GGCTCAGTTC GATGAACTGG CCGCCTTCTC CCAGTTCGCC TCCGATTTGG ATGCTGCAAC ACAACAGCAG CTCTCCCGCG GTAAGCGTTT GCGTGAACTG CTCAAGCAGC CTCAATTCAG CCCGCTGATT TTGGCTGAGC AGGTCGCCAT CGTTTACGCC GGTGTGAAGG GTTTGATCGA TGCTGTTCCC GTGGATCAAG TGGTCAACTT CTCCCGCGAA CTGCGCGAGT ACCTCAAATC CAACAAGCCT GAGTTCATTA ATGAAATTCA GGAGAAGAAG GTGCTGAGCC CTGAAGCTGA GAGCGTTCTG AAGGCCGCTA TCAGCGAAGT CGTGTCCACC ATGGTCGCTT CGGCCAACTG A
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Protein sequence | MVSIRPDEIS AILKQQIEDY DKSVSVSNVG SVLQVGDGIA RVYGLQQAMA GELLEFEDGT EGIALNLEDD NVGAVLMGEG LGIQEGSTVK ATGKIASVPV GDAMLGRVIN SLGRPIDGKG DIAASETRLI ESMAPGIIQR KSVHEPMQTG ITAIDAMIPV GRGQRELIIG DRQTGKTAIA IDTILNQADQ DMICVYVAIG QKAASVANVV EVLRERGALG YTVIVAASAS EPAALQYLAP YTGASIAEYF MYKGKATLVI YDDLSKQAAA YRQMSLLLRR PPGREAYPGD VFYCHSRLLE RAAKLSDAMG KGSMTALPII ETQAGDVSAY IPTNVISITD GQIFLSSDLF NSGLRPAINV GISVSRVGGA AQTKAIKKIA GTLKLELAQF DELAAFSQFA SDLDAATQQQ LSRGKRLREL LKQPQFSPLI LAEQVAIVYA GVKGLIDAVP VDQVVNFSRE LREYLKSNKP EFINEIQEKK VLSPEAESVL KAAISEVVST MVASAN
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