Gene Syncc9902_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0488 
Symbol 
ID3742500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp502670 
End bp504190 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content57% 
IMG OID637770659 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_376500 
Protein GI78184065 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.294002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCCA TCCGTCCCGA CGAGATCAGC GCCATCCTCA AACAGCAGAT TGAGGATTAC 
GACAAGTCAG TTTCCGTCAG CAATGTCGGT TCCGTTCTGC AGGTGGGTGA TGGAATCGCC
CGTGTTTATG GCCTCCAACA GGCCATGGCA GGTGAGCTTC TCGAATTTGA AGACGGCACC
GAAGGGATCG CTCTGAACCT CGAAGACGAC AACGTCGGCG CGGTGTTGAT GGGTGAAGGC
CTTGGTATTC AGGAAGGCAG CACGGTCAAA GCCACCGGCA AGATTGCTTC CGTCCCCGTG
GGCGACGCCA TGTTGGGGCG CGTGATCAAC TCCCTCGGAC GTCCGATCGA TGGCAAAGGC
GACATCGCTG CCTCGGAGAC GCGGCTGATC GAATCGATGG CCCCTGGCAT CATTCAACGG
AAATCGGTGC ATGAGCCGAT GCAGACCGGC ATCACCGCGA TCGACGCAAT GATTCCTGTG
GGTCGCGGCC AACGGGAGCT GATCATTGGT GACCGCCAGA CCGGCAAAAC CGCCATCGCG
ATCGACACGA TCCTGAACCA AGCAGATCAG GACATGATCT GCGTCTACGT GGCCATTGGC
CAAAAGGCTG CGTCCGTAGC CAACGTCGTT GAAGTCCTGC GTGAGCGCGG CGCCCTCGGC
TACACCGTGA TTGTTGCCGC TAGCGCTTCA GAGCCAGCAG CACTTCAGTA CTTGGCTCCA
TATACCGGTG CTTCGATCGC TGAGTACTTC ATGTACAAGG GCAAAGCAAC CTTGGTGATC
TACGACGATC TCTCCAAGCA GGCGGCTGCC TACCGCCAGA TGTCCTTGCT GCTGCGCCGT
CCGCCCGGTC GTGAGGCCTA TCCCGGTGAT GTTTTCTATT GCCACAGCCG TTTGCTTGAG
CGTGCAGCCA AGCTGTCCGA CGCGATGGGC AAAGGTTCGA TGACAGCGCT GCCCATCATC
GAAACCCAAG CCGGTGACGT TTCCGCCTAC ATCCCTACCA ACGTGATTTC GATCACGGAT
GGTCAGATCT TCCTCAGCTC AGACCTGTTC AACTCCGGCC TTCGCCCTGC GATCAACGTG
GGTATTTCCG TGAGTCGTGT TGGTGGTGCT GCGCAAACCA AGGCGATCAA AAAAATTGCT
GGCACCTTGA AGCTGGAGTT GGCTCAGTTC GATGAACTGG CCGCCTTCTC CCAGTTCGCC
TCCGATTTGG ATGCTGCAAC ACAACAGCAG CTCTCCCGCG GTAAGCGTTT GCGTGAACTG
CTCAAGCAGC CTCAATTCAG CCCGCTGATT TTGGCTGAGC AGGTCGCCAT CGTTTACGCC
GGTGTGAAGG GTTTGATCGA TGCTGTTCCC GTGGATCAAG TGGTCAACTT CTCCCGCGAA
CTGCGCGAGT ACCTCAAATC CAACAAGCCT GAGTTCATTA ATGAAATTCA GGAGAAGAAG
GTGCTGAGCC CTGAAGCTGA GAGCGTTCTG AAGGCCGCTA TCAGCGAAGT CGTGTCCACC
ATGGTCGCTT CGGCCAACTG A
 
Protein sequence
MVSIRPDEIS AILKQQIEDY DKSVSVSNVG SVLQVGDGIA RVYGLQQAMA GELLEFEDGT 
EGIALNLEDD NVGAVLMGEG LGIQEGSTVK ATGKIASVPV GDAMLGRVIN SLGRPIDGKG
DIAASETRLI ESMAPGIIQR KSVHEPMQTG ITAIDAMIPV GRGQRELIIG DRQTGKTAIA
IDTILNQADQ DMICVYVAIG QKAASVANVV EVLRERGALG YTVIVAASAS EPAALQYLAP
YTGASIAEYF MYKGKATLVI YDDLSKQAAA YRQMSLLLRR PPGREAYPGD VFYCHSRLLE
RAAKLSDAMG KGSMTALPII ETQAGDVSAY IPTNVISITD GQIFLSSDLF NSGLRPAINV
GISVSRVGGA AQTKAIKKIA GTLKLELAQF DELAAFSQFA SDLDAATQQQ LSRGKRLREL
LKQPQFSPLI LAEQVAIVYA GVKGLIDAVP VDQVVNFSRE LREYLKSNKP EFINEIQEKK
VLSPEAESVL KAAISEVVST MVASAN