Gene Syncc9902_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0406 
Symbol 
ID3742390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp421201 
End bp422394 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID637770577 
ProductABC transporter, membrane component 
Protein accessionYP_376420 
Protein GI78183985 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.449797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG TGTCCACCGG CGAGCATGTG CTGGCACCGG TCCAGCAACG TGGTCAAGCA 
GCGCTCGGCC GCCTCGGCTT GCCGACGCGG AAGCAGGAAG CTTGGCGACT TACCAACCTC
AGCCGACTGG AAGCTGTGGC TCGGATGCCT GTCAATGGCG TGGCCACCGC GTCTGATGCT
CCGCCTTGTT TGGATGGTGT TGTGCGCTTG GTGCTTGACG GCGTCAATGA CCCTCTGGAG
GGTGTGACCT TGCCGGAGGG GCTTACGCAC CTTGAGCCGA AGGAACTGGA GCTTGCCCTT
GGCCACACCC TCGATCGTTG TGGATCGTCT GACGATTGGT TGGTCGAGTT CAACCATGCC
TCCGCTCAAC AGCTATTGGC ATTACGGGTC CGTGGCACGG TTCCACCACT CGAAATCACT
ATGGCGGCCG CGTCTGGCCT CATCCCGACA CGGGTGTTGC TGGTGGTGGA AGAAAAGGCG
CAACTCGAGC TTCTGCAAGT GTTTTCGGGA CGGGGTGAAG CTGCCCATAG CCACCTCATG
GAGGTTCATC TCGGTCAAGA AGCGCAGTTC AATCACGGTG TTTTGGCGTG TGCCGATGGC
GTGGCGGCAT TGTTCGCTCA ATTGGCCGTT GAGCAAGAGC CCCGCAGTAC CTACAACTTC
ACATCAGTAA TTCAGGGTTG GTCGTTGGGA CGGATCGAGC CGCGCGTGGT TCAGGTGGAT
GGACAAGCCT CCACCACGTT GAAGGGTCTG GCCGTTGCCG ATCTTGAGCA GCAACTTGCT
GTGCACACAT CGGTGTGTTT TGAAGGACCC GATGGTGAGC TTGATCAGCT CCAAAAATGC
TTGGCAGCAG GGCGCTCCCA CACAATTTTC AACGGTGCGA TCAATGTGCC GCGTAAGGCG
CAGCGCACCA ACGCAGCGCA ACTCAGTCGA AACCTGTTGC TCTCGGATCG GGCACGCGTC
GACACCAAGC CAGAGTTGGA AATCGTGGCC GACGACGTTC GTTGTGCCCA TGGAGCCACG
GTCTCCCAGC TACAGGAAGA CGAGCTTTTC TACTTGCGAA GCCGTGGGAT TGGAGCTTCC
GATGCTGCGG CACTGTTGTT GCGCGGTGCA TGCCAAGAAG TGGTCGACAG GCTTCCAACC
CATGCGCTTG CTTGGCGACC GCTGGAACGC GTGCTCGCGG GGTTGGCTTC ATGA
 
Protein sequence
MAAVSTGEHV LAPVQQRGQA ALGRLGLPTR KQEAWRLTNL SRLEAVARMP VNGVATASDA 
PPCLDGVVRL VLDGVNDPLE GVTLPEGLTH LEPKELELAL GHTLDRCGSS DDWLVEFNHA
SAQQLLALRV RGTVPPLEIT MAAASGLIPT RVLLVVEEKA QLELLQVFSG RGEAAHSHLM
EVHLGQEAQF NHGVLACADG VAALFAQLAV EQEPRSTYNF TSVIQGWSLG RIEPRVVQVD
GQASTTLKGL AVADLEQQLA VHTSVCFEGP DGELDQLQKC LAAGRSHTIF NGAINVPRKA
QRTNAAQLSR NLLLSDRARV DTKPELEIVA DDVRCAHGAT VSQLQEDELF YLRSRGIGAS
DAAALLLRGA CQEVVDRLPT HALAWRPLER VLAGLAS