Gene Syncc9902_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0379 
Symbol 
ID3743672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp391690 
End bp392394 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID637770550 
ProductVIC family potassium channel protein 
Protein accessionYP_376393 
Protein GI78183958 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGT GGTGGCATTG GAGCCCGTTA CAAGGCAGTG AACGCCTTGG CTTCGCAATC 
ATTGGCGTGG GACGTTTTGG CATCGCGGTC TGCAGAGAAT TGCTGCAAAA CGGTGCGGAC
GTTCTGGCCG TGGATCGATC TGCTCGGGCC ATTGAGGAGC TGCGACAGGT GGAGCCCAGC
GTGGAAGCCC GGGTAGTCGA TTGCACCGAC GAAGAATCCC TACGGGAGGC CGGGGTGCTG
GATATGGGAA CCGTTGTCGT GGCGATCAGC GAACCGATTG AAGCCAGCAT CACCGCAACG
TTGATTGCGA AAGACAGTGA AGGGAGTCAG GTCAAGCAAG TGATCGCTCG GGCTACCAGT
GATCTGCACG AAAAAATGCT GAAACGGGTT GGTGCCGATC GCGTGATCTT CCCCTCAAGA
ATGCAAGGGG AACGACTGGG ACTGGAACTC GTCCGCCCCA ACCTGATGGA GCGACTCGCC
CTGGACGAGC AGCACTGCAT CGAAGAAATC AAAGTTCCGG AACTGTTCGT TGGGCGCTCC
CTGCGGGACC TCAACCTTCG TAAAAACTTC CGGGTGAATG TTTTGGCTGC TGGCCCTCAG
AGCAGCCTCA CGGTGAATCC ACCGGCGTCC CATGTGCTCG AACTCGGGCA TTTGCTCGTT
GTGATGGGCC TGATCGACGA CCTTCAGCGC CTTCCAAAGA TGTAA
 
Protein sequence
MNEWWHWSPL QGSERLGFAI IGVGRFGIAV CRELLQNGAD VLAVDRSARA IEELRQVEPS 
VEARVVDCTD EESLREAGVL DMGTVVVAIS EPIEASITAT LIAKDSEGSQ VKQVIARATS
DLHEKMLKRV GADRVIFPSR MQGERLGLEL VRPNLMERLA LDEQHCIEEI KVPELFVGRS
LRDLNLRKNF RVNVLAAGPQ SSLTVNPPAS HVLELGHLLV VMGLIDDLQR LPKM