Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0324 |
Symbol | |
ID | 3744137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 337693 |
End bp | 339225 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770492 |
Product | porin |
Protein accession | YP_376340 |
Protein GI | 78183905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTT TCCAGCAAAT GCTGGTGGCT CCTGCCGCCC TGGGCCTTCT GGCCTCCGGC GCCAATGCCG CCGAGCTCAA CATCAACGGC GTTTCTGACT ACGCGGCTTC TGCCGACCAA GTCACCAGCG TTACCCAATT CTCCGACGTT TACCCAACTG ACTGGGCCTA TCAGGCGCTC AGCAACTTGG TTGAGCAGTA CGGCTGCGTC GCTGGTTACC CCAACGGCAC CTTCCGCGGC AACCGGGCGA TGACCCGTTA CGAGGCTGCA GCACTGCTGA ACGCATGTCT CGACCGCGTC ACTGAAGTGA CCGACGAACT GCGTCGCCTT CTCAAAGAAT TCGAAACCGA ACTCGCCATC CTCCGCGGAC GCGTTGACGG CCTCGAAGCT CGTGTTGGCG AACTGGAAGC AACCCAGTTC TCCACCACCA CCAAGCTCAA GGGTGTAACC AACTGGGTTC TTGGCGCTGC CAAGTACCAC GGCAACGGCA GCGACGCTGC AGCAACCACC GCCGGCGGCA CCTCCTTCAG CTACAACCTT CAGCTGAACC TGGAAACCAG CTTCACTGGT AAGGATCTGC TGTACACGCG CCTGCGTGCC GGCAACATGG ACAACGTTTA CGGCGGTAAC GGCCTGTTTG CTCAGGAGTA CGGCTTCGAC TCCGACAACG CAATTGTTGT CGACCGTCTG TACTACAGCT TCCCTGTCGG TGACGAGTTC ACCGTTGTTG CTGGACCTCG CGTCCGTATG GACGACATGC TGCCCGTATG GCCTAGCGCC TATCCGTCAG ACATGACGTA CGACTTCTTC ACCTACGCCG GTGCGCCTGG TGCTTACAAC CTCGCCCTCG GTGCTGGTGC TGGTGTCTAT TGGCAAACCG AAGGTGGTTT CAGCGTTTCC ACCAGCTACT TGTCTGTCAA CGGCAACAAC AGCTGCCCAA ACAATGATTT CTGTGGCGAC AGCGCCGGCG GCATCGGCAC CGACGCCGCT GCTTTCAGCG CCACCACTCA GATCGCTTAT GCACCTGAGA GCTGGGGTGT CGCTGCTGCC TACACCAAGG CTTCCGGCGT GAACGGTGTT GGCCTCTACC AGGGCAATGC CACCATCCCT GCTGCGGCTC TCTCCTACCT CGACGATCAG TCCAACTCCT TCGGACTGAG CGCCTGGTGG ACTCCTGAAG AGTCCGGCTG GATTCCTTCC ATCAGCGTCG GTTACGGCGG CTCATGGTTG AGCTTCGGCG GCGACGACGC CTATACCAAC TCTTGGTATG TCGGCATGGA GTGGGACGAC GCCCTCATCG AAGGCAACTC CTTCGGTATT GCCACTGGTC AGCCCACCTA CATCGTCTCT GTTGACGACG ATGACTACAA CGCTGGTGCT GGCTACGCCT GGGAATTCTT CTACAAGTTC CAGGTCACCG ACAACATCAC TGTGACTCCC GCAATCCACT ACCTCAGCAA GCCTTTTGCT GAGCAGGATT CCAATGGTCT CAACGCCATG AGCGGCTTGG TCAAAACCAC CTTCAAGTTC TGA
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Protein sequence | MKLFQQMLVA PAALGLLASG ANAAELNING VSDYAASADQ VTSVTQFSDV YPTDWAYQAL SNLVEQYGCV AGYPNGTFRG NRAMTRYEAA ALLNACLDRV TEVTDELRRL LKEFETELAI LRGRVDGLEA RVGELEATQF STTTKLKGVT NWVLGAAKYH GNGSDAAATT AGGTSFSYNL QLNLETSFTG KDLLYTRLRA GNMDNVYGGN GLFAQEYGFD SDNAIVVDRL YYSFPVGDEF TVVAGPRVRM DDMLPVWPSA YPSDMTYDFF TYAGAPGAYN LALGAGAGVY WQTEGGFSVS TSYLSVNGNN SCPNNDFCGD SAGGIGTDAA AFSATTQIAY APESWGVAAA YTKASGVNGV GLYQGNATIP AAALSYLDDQ SNSFGLSAWW TPEESGWIPS ISVGYGGSWL SFGGDDAYTN SWYVGMEWDD ALIEGNSFGI ATGQPTYIVS VDDDDYNAGA GYAWEFFYKF QVTDNITVTP AIHYLSKPFA EQDSNGLNAM SGLVKTTFKF
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