Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0323 |
Symbol | |
ID | 3744136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 335934 |
End bp | 337475 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637770491 |
Product | porin |
Protein accession | YP_376339 |
Protein GI | 78183904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.222297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTT TCCAGCAAAT GCTGGTGGCT CCTGCCGCCC TGGGCCTTCT GGCCTCCGGC GCCAATGCCG CCGAGCTCAA CATCAACGGC GTTTCTGACT ACGCGGCTTC TGCCGACCAA GTCACCAGCG TTACCCAATT CTCCGACGTT TACCCAACTG ACTGGGCCTA TCAGGCGCTC AGCAACTTGG TTGAGCAGTA CGGCTGCGTC GCTGGTTACC CCAACGGCAC CTTCCGCGGC AACCGGGCGA TGACCCGTTA CGAGGCTGCA GCACTGCTGA ACGCATGTCT CGACCGCGTC ACTGAAGTGA CCGACGAACT GCGTCGCCTT CTCAAAGAAT TCGAAACCGA ACTCGCCATC CTCCGCGGAC GCGTTGACGG CCTCGAAGCT CGTGTTGGCG AACTGGAAGC AACCCAGTTC TCCACCACCA CCAAGCTCAA GGGCAGCACG CACTGGGTTC TTGGCGCTGC CAAGTACCAC GGCGAAGGAA GCAAGGCCGA GGCAACTGCT AACGGCGGTA CATCCTTCAG TTACGACCTC CGTCTTGCTC TTGAGACCAG CTTCACCGGC AAAGACAGCT TGGTAACGCG TCTGCGCTCC GGCAACATGA ACAACATCTA CGGCGGCAAC GGCGTCGGTT TGTTCGGTCA GGAGTACGGC GTTAACACTG ATAACGCTGT CGTCATCGAC CGTTTGTTCT ATAGCTTCCC CCTCGGTGAC GAGTTCACCA TCGTTGGTGG CCCTCGCGTC CGTATGGACA ACATGCTGCC TGTGTGGCCA AGCGCCTATC CGTCAGATAT GACGATGGAC TTCTTCACCT ACGCCGGTGC GCCTGGTGCT TACAACCTCG CCCTCGGCGG TGGTGCAGGT ATCTACTGGC AGACCGAAGG TGGTTTCAGC GTTTCCACCA GCTACCTTTC AACAGATGCT GAACTCAGCG ACCCCAATGC GGGTGGTTTG CTGACAGATG CGGCAGGTAC AAGCGCCACA ACTCAGATCG CTTATGCGCC TGAGAATTGG GGTATTGCTG GTGCATTCAC TTATGCCTCC GGTGGAGAGG GCGGTGGTGC CCTTTATGGC GGTAATGGCA CTCCTGGCGC TGTTGCTCTT TCTGGTTCCG GCAACACATA CAGCTATGGC CTAAGTGCTT GGTGGATGCC AGAGGATTCT GGATTGATTC CTTCCATTAG TGCTGGTTGG GGCTTGACGG ATATTCCTGA TCCCTCCATC AGCGGAGTGA AGGAGGCAAC CACACAGTCC TGGTATGTCG GCTTGGAGTG GAGTGATGTG TTTGTTGAGG GCAACTCCCT CGGTATGGCG GTTGGTCAGC CCACGTTTAT CTCCGACGTA GACACCAAGA AGGGCGTTGA TGATTTCGTC GCTGGCTCAG GCTACGCCTG GGAATTCTTC TACAAGTTCC AGGTCACCGA CAACATCACC GTGACTCCTG CCATTCACTA TCTGAGCAAG CCTTACGCAA GCCAGGATTC CGATGGCCTC AACGCTATGA GCGGCCTGAT CAAAACTACC TTCAAGTTCT GA
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Protein sequence | MKLFQQMLVA PAALGLLASG ANAAELNING VSDYAASADQ VTSVTQFSDV YPTDWAYQAL SNLVEQYGCV AGYPNGTFRG NRAMTRYEAA ALLNACLDRV TEVTDELRRL LKEFETELAI LRGRVDGLEA RVGELEATQF STTTKLKGST HWVLGAAKYH GEGSKAEATA NGGTSFSYDL RLALETSFTG KDSLVTRLRS GNMNNIYGGN GVGLFGQEYG VNTDNAVVID RLFYSFPLGD EFTIVGGPRV RMDNMLPVWP SAYPSDMTMD FFTYAGAPGA YNLALGGGAG IYWQTEGGFS VSTSYLSTDA ELSDPNAGGL LTDAAGTSAT TQIAYAPENW GIAGAFTYAS GGEGGGALYG GNGTPGAVAL SGSGNTYSYG LSAWWMPEDS GLIPSISAGW GLTDIPDPSI SGVKEATTQS WYVGLEWSDV FVEGNSLGMA VGQPTFISDV DTKKGVDDFV AGSGYAWEFF YKFQVTDNIT VTPAIHYLSK PYASQDSDGL NAMSGLIKTT FKF
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