| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0293 |
|---|
| Symbol | |
|---|
| ID | 3742790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 304436 |
|---|
| End bp | 306445 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637770460 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit F |
|---|
| Protein accession | YP_376309 |
|---|
| Protein GI | 78183875 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCGG CAGCGGAACT GGCCTGGCTG ATTCCTGTTC TTCCCCTGTT TGGGGCTGTA
ATAACCGGGC TTGGGCTGAT CAGCTTTAAC CGAACAGTGA ATCGGTTGCG CAAGCCCGTT
GCACTGCTTC TCATCACCTG CGTTGGCGCA GCTGCTGTGT TGAGTTACGC CATTTTGGCG
AGTCAACTAG CTGGTTCTCC GCCGGTTGAG CATCTCTTCA TCTGGGCAAG TGCAGGCGAC
TTCACATTGC CCATGGGGTA TGTCGTTGAC CCGTTGGGCG CAGTGATGTT GTCGCTGGTC
ACCACCATTG CCTTATTGGT GATGGTGTAC TCCCACGGGT ACATGGCCCA CGACAAGGGT
TACGTTCGGT TTTTCACTTA TCTCGCCCTC TTCAGCAGCT CGATGCTTGG GCTGATTATT
AGTCCCAATC TGCTCGAGAT CTACGTGTTC TGGGAGCTGG TGGGGATGTG TTCCTATCTA
CTCGTTGGTT TCTGGTACGA CAGAGACGGC GCTGCCCACG CGGCCCAAAA AGCATTTGTA
GTCAACCGCG TTGGCGACTT CGGACTTCTC TTGGGAATCC TTGGCCTGTT TTGGGCCACT
GGAAGCTTTG ATTTCCAAGG CATTGCCGAT GGTTTGCAGC AAGGGTTAGC CAATGGCAGC
GTCGCTCCAT GGGCTGCACT ACTGCTTTGC CTCCTGGTGT TTATGGGTCC GATGGCGAAA
TCGGCTCAAT TCCCCCTCCA CGTTTGGCTA CCCGATGCCA TGGAGGGACC AACGCCCATC
TCAGCTCTCA TTCACGCCGC AACGATGGTG GCGGCTGGGG TTTTTCTCGT CGCGCGTTTG
GATCCGCTTT ATACCCAATT CCCAGTTGTT CAAACCGTTA TTGCAGTGGT TGGAACGATC
ACCTGCTTCC TTGGAGCCTC CATCGCCCTA ACCCAGATGG ACCTCAAAAA AGGTTTGGCC
TACAGCACCG TGTCGCAACT CGGTTACATG ATGTTGGCCA TGGGCTGCGG TGCTCCGGTT
GCCGGAATGT TCCATCTGGT GACGCACGCT TTTTTCAAAG CAATGCTGTT TTTGGGCTCA
GGGTCCGTCA TCCATGCCAT GGAAGAAGTG GTGGGTCACG AACCCGTCTT GGCTCAGGAC
ATGCGCCTCA TGGGTGGCTT GCGCCAAAAG ATGCCGATTA CCGCCATCAC CTTTTTTATC
GGTTGCATCG CGATCAGCGG AATCCCTCCT TTGGCAGGTT TCTGGAGCAA AGATGAAATC
CTGGGCCAAG CCTTCAATGC CTTCCCAGTG CTGTGGCTTG TCGGGTTCCT CACCGCCGGC
ATGACGGCCT TCTACATGTT CCGGCTTTAC TTCCTAACCT TCGAAGGGGA GTTCCGTGGC
AACGACAAGG CGATGCAAAC ATCGCTGCTT GCCGCCGTGG GAAAAGAGAA CAAGGAGCAT
GGCGACCACG CCACCAGCGT GCATGAGTCG GCCTGGCCCA TGACAGTTCC CCTGGCTGTT
TTGGCTGTTC CATCCGTGCT GATTGGTTTG CTAGGAACGC CTTGGAATAG TCGCTTTGCC
GGTTTGTTGA ACCCTGAAGA AGCAGCGGAA ATGGCCGAAC ATTTCAGCTG GGCGGAGTTC
CTACCTCTCG CAGGAGCCTC AGTTGCCATT TCACTGGTGG GCATCACCCT TGCCGTTCTC
GCTTACGCCC TGCGCCGGAT CGATCTAGGT CAGCTGGTCG CTGGTCGCTT CCCCACGATC
AACGCCTTCC TGGCGAACAA GTGGTATCTC GATTCGATCA ACGAAAAATT ATTTGTTCGC
GGTAGTCGGA AGCTCGCTAG AGAGGTTCTT GAGGTGGACG CAAAGGTGGT GGATGGGGTG
GTGAACCTCA CCGGTTTGCT CACCCTCGGT AGCGGAGAAG GCTTGAAATA CCTGGAGACT
GGCCGTGCTC AGTTCTATGC CTTGATCGTG TTTGGCGGCG TCATTGCGAT GGTTGTTTTA
TTCGGTGTGA TCGGCGGACC GATCAGCTGA
|
|---|
| Protein sequence | MPSAAELAWL IPVLPLFGAV ITGLGLISFN RTVNRLRKPV ALLLITCVGA AAVLSYAILA
SQLAGSPPVE HLFIWASAGD FTLPMGYVVD PLGAVMLSLV TTIALLVMVY SHGYMAHDKG
YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV
VNRVGDFGLL LGILGLFWAT GSFDFQGIAD GLQQGLANGS VAPWAALLLC LLVFMGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL DPLYTQFPVV QTVIAVVGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGMFHLVTHA FFKAMLFLGS
GSVIHAMEEV VGHEPVLAQD MRLMGGLRQK MPITAITFFI GCIAISGIPP LAGFWSKDEI
LGQAFNAFPV LWLVGFLTAG MTAFYMFRLY FLTFEGEFRG NDKAMQTSLL AAVGKENKEH
GDHATSVHES AWPMTVPLAV LAVPSVLIGL LGTPWNSRFA GLLNPEEAAE MAEHFSWAEF
LPLAGASVAI SLVGITLAVL AYALRRIDLG QLVAGRFPTI NAFLANKWYL DSINEKLFVR
GSRKLAREVL EVDAKVVDGV VNLTGLLTLG SGEGLKYLET GRAQFYALIV FGGVIAMVVL
FGVIGGPIS
|
|---|
| |