Gene Syncc9902_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0282 
Symbol 
ID3742779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp296198 
End bp296800 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content55% 
IMG OID637770449 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_376298 
Protein GI78183864 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTG CGACAAGCAC GGAACTGATT TGTTTTCTAG TGCTGTCCGC TGTCGTCGTG 
ACCGGCGCGC TTGGTGTTGT CCTTCTCAGC AACATTGTTT ATTCAGCCTT CCTCCTTGGT 
GGAGTGTTTA TGGCAGTGGC TGGTCTTTAT CTGCTTTTGA ACGCCAGCTT CGTTGCGGCG 
GCACAAGTGA TGATCTACGT CGGGGCTATC AACGTTTTGA TCTTGTTCGC GATCATGCTC 
GTGAACAAGC GGGAAGATCT CAAAGCGATC GCCAACCTCA CCACCCGTCG GATTGTGTCG 
GGTGGAGTTT GTTTAGGACT TCTAGCTCTC TTAGTGCGCG TGGTGGTCAC GACACCCTGG 
TCCCTGCCTG GACCAGCTGC GGTGGGGGAA GAAGCCACTG CGCGCATTGG TGAACACCTC 
TTCACGGATT ACTTGCTCCC GTTTGAGTTG GCGTCTGTGC TGTTGCTCAT GGCCATGATT 
GGAGCCATTG TTTTGGCCCG TCGTGATGTG TTGGCGAACG ACGTGGTCAC TGGTGAAGCG 
GCCGATCAGG GCTTGATCGA AAAAGCACGA ACTCCCCTCC TCCTAGAGCG GCGCTCCTCT 
TGA
 
Protein sequence
MTIATSTELI CFLVLSAVVV TGALGVVLLS NIVYSAFLLG GVFMAVAGLY LLLNASFVAA 
AQVMIYVGAI NVLILFAIML VNKREDLKAI ANLTTRRIVS GGVCLGLLAL LVRVVVTTPW 
SLPGPAAVGE EATARIGEHL FTDYLLPFEL ASVLLLMAMI GAIVLARRDV LANDVVTGEA 
ADQGLIEKAR TPLLLERRSS