| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0175 |
|---|
| Symbol | |
|---|
| ID | 3743688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 181698 |
|---|
| End bp | 183155 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637770343 |
|---|
| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| Protein accession | YP_376193 |
|---|
| Protein GI | 78183759 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGCCA CACCCCTGAT TCCTGTGATC CTCTGCGGCG GAACCGGTAC TCGGCTTTGG
CCGCTGTCGC GCGCCAGTTA CCCCAAGCAG TATTGGCCGT TGAGTGGTGA TGGCGACGCC
ACCTTGCTGC AGCAAACCCA GCAGCGACTC GAGGGGCTGG AGGCACTGGC GGCTCCCTTG
CTGATCTGCA ATGAAGACCA CCGCTTCATC GTGGCGGAGC AAATGCGCCA ACTGGGCATT
GAACCCAACG CGATCCTGTT GGAGCCAATG GGACGCAACA CCGCTCCAGC AGTGACCGTG
GCAGCACTAC AAGCCACCGC TGATGGCGAT GACCCCCTCT TGCTGGTGCT GGCGGCGGAC
CATCTGATCC GCAATGCCGA ACAGTTCCGC GCCGCCGTTG CCGCTGGGAG GCCGGCCGCA
GAAGCGGGCC GTTTAGTGAC CTTTGGCATC GTGCCTACGG CTCCGGAGAC CGGATACGGC
TACATCGAAG CAGCCAAAGA CTTCAACGCT GGAGAGCTGA AGGATGTTCC GATCGCGCGA
TTTGTCGAAA AACCGGATCA AGCAACCGCA GAGCAGTTCT TAGCGACCGG CCGTTTCACC
TGGAATAGCG GCATGTTCCT GTTCCGTGCC AGCGCCATGC TGGCAGAACT GGACCGCCTC
AACCCCGAGG TGGTGAGTTG TTGCCGGGCG GCCCTGGAGC AGGACACCGC CGACCTGGAG
TTTCTGCGCT TGGAACGGGA AGCCTTTGCT AAGTGCCCAA ATGTGGCCAT CGACGTGGCC
GTGATGGAAA AGACAGAACT GGGCTCCGTG CTGCCCCTGG ATGCGGGCTG GAGCGATGTG
GGGAGTTGGA GTGCCCTCTG GGAGACATCC GATCGCGACG GCGATGGCAA CGTTCTACAG
GGACGGGTGA TCTCCCAAGG CAGCCGCAAC TGCTATCTCC GCAGCGAGCA CCGGTTGGTG
GTGGGGCTGG GCGTGGAGAA CCTGGTGGTG GTGGAAACGG ATGATGCCGT TCTCATCGCA
GATCGATCCC AGGCCCAAGC GATCAAAACC GTGGTGAAGC AACTCGAGGC CGACGGCAGT
CCAGAGGGAA AAGCGCACCG CAAGATCTAC CGCCCGTGGG GCCACTACAC CGGGGTGACA
GAAGGGGACC GTTGGCAGGT GAAACGCATT TCCGTAAAAC CAGGAGCCAG TTTGTCGCTG
CAAATGCACC ACCATCGAGC CGAACACTGG GTGGTCGTGA AGGGCACGGC GCTTGTGGAA
CGCGACGGCA GTGAGCAACT GGTGGGTGAA AACCAAAGCA CATATATCCC AATGGGATGC
CGGCACCGTC TCTCCAACCC TGGCCGCATC CCAGTGGAGC TCATCGAAGT GCAGAGTGGC
GAGTACCTCG GTGAAGACGA CATCTTGCGC TTCGAAGACC GCTATGGCCG CAGTGATCTA
AGCCTCTTAC AAAATTAA
|
|---|
| Protein sequence | MAATPLIPVI LCGGTGTRLW PLSRASYPKQ YWPLSGDGDA TLLQQTQQRL EGLEALAAPL
LICNEDHRFI VAEQMRQLGI EPNAILLEPM GRNTAPAVTV AALQATADGD DPLLLVLAAD
HLIRNAEQFR AAVAAGRPAA EAGRLVTFGI VPTAPETGYG YIEAAKDFNA GELKDVPIAR
FVEKPDQATA EQFLATGRFT WNSGMFLFRA SAMLAELDRL NPEVVSCCRA ALEQDTADLE
FLRLEREAFA KCPNVAIDVA VMEKTELGSV LPLDAGWSDV GSWSALWETS DRDGDGNVLQ
GRVISQGSRN CYLRSEHRLV VGLGVENLVV VETDDAVLIA DRSQAQAIKT VVKQLEADGS
PEGKAHRKIY RPWGHYTGVT EGDRWQVKRI SVKPGASLSL QMHHHRAEHW VVVKGTALVE
RDGSEQLVGE NQSTYIPMGC RHRLSNPGRI PVELIEVQSG EYLGEDDILR FEDRYGRSDL
SLLQN
|
|---|
| |