Gene Syncc9902_0133 details

Gene Information

• Locus tag: Syncc9902_0133
• Symbol: gyrB
• ID: 3744008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 142611
• End bp: 144578
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637770300
• Product: DNA gyrase subunit B
• Protein accession: YP_376151
• Protein GI: 78183717
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.879154
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACG CTTCCAAGGT CCAGAACGAA TACGGCGCTG AACAGATTCA GGTGTTGGAG 
GGGCTTGAGC CCGTCCGGAA ACGCCCGGGC ATGTACATCG GCACCACCGG ACCCCGGGGT 
CTGCATCACC TGGTGTACGA GGTGGTGGAC AACGCGGTGG ATGAGGCCCT GGCTGGGCAT 
TGCGACCGAA TCACTGTGAT TCTTGGTGCT GATGGCTCGG CTTCCGTAAC CGATAACGGT 
CGCGGCATCC CCACGGATGT GCATCCCCGC ACGGGCAAGA GTGCCTTGGA GACCGTGCTT 
ACTGTTTTGC ACGCCGGTGG AAAGTTTGGA GCTGGTGGAT ACAAGGTGTC CGGTGGCTTG 
CACGGCGTTG GTGTGTCCGT GGTGAATGCC CTGAGCGAAT GGGTGCAGGT CACCGTGCGT 
CGTCAAGGTC AGGTGCACCG TCAACGGTTC GAACGGGGCG CTGCGATTGG CACTTTGTTG 
TCAGAGTCTC AGCCAGAGGC TGAGCAGGGT GAAACCGGCA CCACGGTGTG TTTCTTGCCG 
GATACGCAAA TTTTTACCGG CGGCATTGTT TTCGATTACG CCACCCTCTC AGCTCGTTTA 
CGAGAGCTGG CCTACCTGAA TGGTGGAGTC CAGATCGTGT TTCGCGACGA GCGCGAATCC 
TCCCTTAGCG ATGCCGGTGA TCCCCATGAG GAGATCTATT TCTACGAAGG AGGAATCAAG 
GAATACGTCG CATACATGAA TAAGGCGAAG GATGCCCTTC ACCCAGACAT TATTTATGTG 
AATTCTGAGA AAGATGGTGT TCAAGTGGAA GCTGCATTGC AGTGGTGCGC TGATGCCTAT 
TCCGACAGCA TTCTTGGTTT TGCCAACAAC ATTCGCACAG TCGATGGTGG AACGCATATT 
GAAGGCTTAA AAACGGTCCT CACCCGCACC TTGAATGCTT TTGCTAAAAA ATTAGGTAAA 
CGCAAGGAAG CTGATTCCAA CTTGGCCGGT GAAAACATCC GTGAGGGTTT AACGGCGGTT 
TTGTCGGTAA AAGTGCCGGA ACCGGAGTTT GAAGGGCAAA CAAAAACCAA GCTCGGCAAC 
ACCGAGGTGC GTGGAATTGT TGATAATTTA GTTGGCGAAT CTCTCAGCCA ATTTTTAGAA 
TTTAATCCTT CAGTGATCAG TCTGATCCTG GAGAAAGCGA TTCAAGCCTT TAATGCTGCT 
GAGGCAGCCC GTCGTGCCCG GGAATTAGTG CGACGCAAGA GTGTTTTAGA GAGTTCAACC 
CTCCCTGGAA AGTTGGCGGA TTGCAGTTCC CGCGATCCCA GTGAGTCTGA GATCTACATC 
GTGGAGGGCG ATTCGGCTGG TGGTTCGGCC AAGCAAGGAC GCGACCGTCG TTTCCAAGCA 
ATTCTTCCGT TGCGGGGCAA GATTCTCAAT ATTGAGAAAA CAGACGATTC GAAGATTTAT 
AAAAACACAG AAATTCAAGC TCTAATTACA GCTTTAGGCC TGGGTATTAA AGGGGAAGAA 
TTTGATCAAA AAAGCCTCCG TTATCACCGT GTTGTGATCA TGACTGATGC TGATGTGGAT 
GGTGCCCACA TTCGCACCTT GATCCTTACA TTCTTCTACC GCTACAAGCG GGAGTTGGTG 
GAAGGTGGAT ATATTTACAT AGCCTGTCCG CCTCTTTATA AGGTTGAGCG CGGTAAAAAT 
CACACCTATT GTTATAACGA ATCAGACCTC CAAAAGACGC TTAAAGGGTT TGGTGAAAAT 
GCCAAATACA CGATCCAGCG TTTTAAGGGT TTGGGAGAAA TGATGCCCAA GCAATTGTGG 
GAAACCACGA TGGATCCCAG TACGCGGATG ATGAAGCGAA TTGAGATCGA AGATGCTTTG 
GAAGCTGATC GAATTTTTAC GATTCTGATG GGCGACAAAG TAGCTCCACG CCGTGAGTTC 
ATCGAAACTC ACAGCAAAGA ACTCGACATG GCAGCACTCG ATATTTAA 

 

Protein sequence

MSDASKVQNE YGAEQIQVLE GLEPVRKRPG MYIGTTGPRG LHHLVYEVVD NAVDEALAGH 
CDRITVILGA DGSASVTDNG RGIPTDVHPR TGKSALETVL TVLHAGGKFG AGGYKVSGGL 
HGVGVSVVNA LSEWVQVTVR RQGQVHRQRF ERGAAIGTLL SESQPEAEQG ETGTTVCFLP 
DTQIFTGGIV FDYATLSARL RELAYLNGGV QIVFRDERES SLSDAGDPHE EIYFYEGGIK 
EYVAYMNKAK DALHPDIIYV NSEKDGVQVE AALQWCADAY SDSILGFANN IRTVDGGTHI 
EGLKTVLTRT LNAFAKKLGK RKEADSNLAG ENIREGLTAV LSVKVPEPEF EGQTKTKLGN 
TEVRGIVDNL VGESLSQFLE FNPSVISLIL EKAIQAFNAA EAARRARELV RRKSVLESST 
LPGKLADCSS RDPSESEIYI VEGDSAGGSA KQGRDRRFQA ILPLRGKILN IEKTDDSKIY 
KNTEIQALIT ALGLGIKGEE FDQKSLRYHR VVIMTDADVD GAHIRTLILT FFYRYKRELV 
EGGYIYIACP PLYKVERGKN HTYCYNESDL QKTLKGFGEN AKYTIQRFKG LGEMMPKQLW 
ETTMDPSTRM MKRIEIEDAL EADRIFTILM GDKVAPRREF IETHSKELDM AALDI