Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0131 |
Symbol | infC |
ID | 3744006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 140846 |
End bp | 141499 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637770298 |
Product | translation initiation factor IF-3 |
Protein accession | YP_376149 |
Protein GI | 78183715 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.122365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCCAC GTCCCCGTTT TGACCGTCGC GCTCCAGTAA GGGAGCTTCC AAACATCAAT GACCGAATCA GTTACCCCCA GTTGCGGGTT GTTGATTCAG ACGGCAGCCA ACTCGGAGTG ATCAGCAGGG AAGAAGCGCT GGAAGTGTCC AAAGAGCGTG AATTGGATCT GGTGCTTGTC AGCGAAAAGG CCGATCCGCC GGTGTGCCGG ATCATGGACT ACGGCAAGTT CAAATTCGAG CAGGAAAAGA AAGCCAAGGA AGCGAAGAAG AAGTCACACC AGACCGAAGT TAAAGAAGTA AAAATGCGAT ACAAAATTGA CTCCCATGAT TACGACGTGC GAATCGGCCA AGCCCAACGC TTCCTCAAAG CCGGCGACAA GGTGAAGTGC ACCGTGATTT TCCGTGGCCG GGAAATTCAA CACACCGCAT TAGCAGAAGT TTTGTTGCGG CGCATGGCGA AAGATTTGGA AGAAAAGGCC GAAATCCAGC AATCCCCAAA GCGAGAGGGA CGCAACATGA TCATGTTCCT GACGCCTCGT AAGACCCCCC TCCTGAAAAA AGACGACAAG GATTCAAGCG TGCACCAAGC GATCCGCACG ATCCCTGCAC CTCCACGGTC CACTGCCGCC AAAGTGGCGG CCCCTCAGGC CTGA
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Protein sequence | MAPRPRFDRR APVRELPNIN DRISYPQLRV VDSDGSQLGV ISREEALEVS KERELDLVLV SEKADPPVCR IMDYGKFKFE QEKKAKEAKK KSHQTEVKEV KMRYKIDSHD YDVRIGQAQR FLKAGDKVKC TVIFRGREIQ HTALAEVLLR RMAKDLEEKA EIQQSPKREG RNMIMFLTPR KTPLLKKDDK DSSVHQAIRT IPAPPRSTAA KVAAPQA
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