Gene Syncc9902_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0131 
SymbolinfC 
ID3744006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp140846 
End bp141499 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID637770298 
Producttranslation initiation factor IF-3 
Protein accessionYP_376149 
Protein GI78183715 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.122365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCAC GTCCCCGTTT TGACCGTCGC GCTCCAGTAA GGGAGCTTCC AAACATCAAT 
GACCGAATCA GTTACCCCCA GTTGCGGGTT GTTGATTCAG ACGGCAGCCA ACTCGGAGTG
ATCAGCAGGG AAGAAGCGCT GGAAGTGTCC AAAGAGCGTG AATTGGATCT GGTGCTTGTC
AGCGAAAAGG CCGATCCGCC GGTGTGCCGG ATCATGGACT ACGGCAAGTT CAAATTCGAG
CAGGAAAAGA AAGCCAAGGA AGCGAAGAAG AAGTCACACC AGACCGAAGT TAAAGAAGTA
AAAATGCGAT ACAAAATTGA CTCCCATGAT TACGACGTGC GAATCGGCCA AGCCCAACGC
TTCCTCAAAG CCGGCGACAA GGTGAAGTGC ACCGTGATTT TCCGTGGCCG GGAAATTCAA
CACACCGCAT TAGCAGAAGT TTTGTTGCGG CGCATGGCGA AAGATTTGGA AGAAAAGGCC
GAAATCCAGC AATCCCCAAA GCGAGAGGGA CGCAACATGA TCATGTTCCT GACGCCTCGT
AAGACCCCCC TCCTGAAAAA AGACGACAAG GATTCAAGCG TGCACCAAGC GATCCGCACG
ATCCCTGCAC CTCCACGGTC CACTGCCGCC AAAGTGGCGG CCCCTCAGGC CTGA
 
Protein sequence
MAPRPRFDRR APVRELPNIN DRISYPQLRV VDSDGSQLGV ISREEALEVS KERELDLVLV 
SEKADPPVCR IMDYGKFKFE QEKKAKEAKK KSHQTEVKEV KMRYKIDSHD YDVRIGQAQR
FLKAGDKVKC TVIFRGREIQ HTALAEVLLR RMAKDLEEKA EIQQSPKREG RNMIMFLTPR
KTPLLKKDDK DSSVHQAIRT IPAPPRSTAA KVAAPQA