| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0123 |
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| Symbol | secA |
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| ID | 3743998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 131155 |
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| End bp | 133968 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637770290 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_376141 |
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| Protein GI | 78183707 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.211044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGC TCCTGCTGGG TGACCCTAAT GCCCGCAAGC TGAAGCGTTA TTCCCCTATT
GTCAGTGATA TCAACCTATT AGAAGAGGAT ATTTCCCCTC TGTCTGACGA TGAACTTCGC
AGCAGAACTT CTGATCTACG TCAGCGTCTA TTTAATGCTG GTGACTTGCA TAATCAGATT
CCAATATTAG ATGAGCTGTT ACCTGAGGCT TTTTCCATTG TTCGTGAAGC CTCCAAGCGT
GTTCTTGGTA TGCGACATTT TGATGTTCAA TTGATTGGAG GGATGGTGCT GCATGAGGGT
CAGATTGCTG AGATGAAAAC TGGCGAAGGC AAAACACTTG TTGCCACATT ACCGAGTTAT
TTAAATGCTC TTACAGGTCG TGGTGTTCAT GTGGTCACAG TTAATGATTA TCTTGCTCGT
CGTGATGCCG AGTGGATGGG TCAGGTTCAT CGTTTTCTCG GATTATCTGT TGGTTTGATC
CAGCAGGATA TGCGTCCTGA GGAAAGACGT CGCAACTACG CTTGTGACAT CACCTATGCG
ACCAATTCTG AGCTTGGCTT CGATTATCTT CGCGACAACA TGGCTGCTGA TATTTCTGAA
GTAGTACAAC GTGAATTTCA GTTTTGCGTG ATTGATGAGG TGGATTCGAT CCTCATCGAC
GAGGCGCGCA CACCATTAAT TATTTCTGGC CAGGTCGAGC GGGAGCAAGA AAAGTATCAA
CAAGCTGCCC AGTTGGCCGC CTCCCTTGAA CGCTCTGCGG AGATGGGCAA AGACGGCATC
GATCCTGAGG GTGATTACGA GGTGGATGAA AAGCAGCGCA GCTGCACCCT TACGGATGAA
GGTTTTGCAA AAGCTGAGCA GACTTTGGGT GTGCAGGATT TGTTTGATCC CCAGGACCCC
TGGGCTCACT ACATCACCAA CGCTCTTAAG GCGAAGGAGT TGTTTGTGAA GGATGTGAAT
TACATCGTTC GCGATGATGA AGCGGTGATT GTCGATGAAT TCACGGGTCG CGTGATGCCT
GGCCGACGTT GGAGCGATGG GCAGCACCAG GCGATTGAGG CGAAGGAAAG CTTGCAGATC
CAACCGGAGA CCCAAACCCT CGCTTCGATT ACCTATCAGA ACTTCTTCCT GCTCTATCCG
CGATTGGCCG GCATGACCGG CACGGCCAAA ACAGAGGAAG TTGAGTTCGA GAAGACCTAC
AAACTGCAGA CCACGATTGT TCCGACCAAT CGCATTCGTG CACGTCAGGA CTGGGCCGAT
CAGGTTTACA AAACCGAAGT AGCGAAGTGG CGGGCTGTTG CTAACGAAAC CGCCGATATC
CACAAAAAAG CGCGTCCGGT GCTGGTGGGC ACCACGTCGG TTGAAAAGAG TGAGTTGTTG
AGCAGCTTGC TAACGGAACA AGACATTCCC CACAACCTGC TCAATGCCAA ACCCGAAAAT
GTGGAACGGG AATCTGAAAT TGTGGCTCAA GCAGGCCGCG CCGGTGCTGT CACGATTGCT
ACCAACATGG CGGGTCGTGG CACCGACATC ATCCTTGGTG GGAACAGCGA TTACATGGCT
CGCCTCAAGT TGCGAGAGGT GTTGCTCAGT CGCCTGGTGA AGCCTGAAGA TGGTCCACTT
CCATCGCTCC CTGTCCAAGA TTCAGCCACT GCGTCCGGGT TCTCTGAGGC GTCCGCGACT
GTTGCTCCTC GGGTTAGTGC CAGCCTTTAT CCTTGTGAAC TTTCGGGCCC AACCGATCAA
CTCCTCGCGC AGTTAGCCCG TGATCTGGTG AAGGCATGGG GTGATCGCGC CCTCAGCGTG
CTCGATCTTG AGGAGCGCAT TGCCACCGCT GCTGAAAAAG CCCCCACCGA TGATGCTCAG
ATCCAATCGT TGCGGGAAGC GATTGCTTTT GTGCGCGGTG AATACGACGC AGTTGTGAAG
GAGGAGGAAG CCCGTGTGCG CGATGCCGGC GGGTTGCACG TCATTGGTAC CGAGCGACAT
GAGTCGCGCC GAGTGGACAA CCAGCTTCGC GGTCGTGCTG GACGTCAGGG CGACCCCGGT
TCCACACGCT TTTTCCTCTC GCTGGGCGAC AACCTGCTGC GCATTTTTGG TGGCGAGCGT
GTTGCCGGTT TGATGAATGC ATTCCGGGTT GAGGAAGACA TGCCGATTGA GTCGGGCATG
CTGACACGCT CTCTTGAAGG GGCTCAGAAA AAAGTCGAGA CGTACTATTA CGACATCCGT
AAGCAGGTGT TTGAGTACGA CGAGGTGATG AACAACCAGC GCCGTGCTGT GTATTCTGAA
CGCCGTCGTG TGTTGGATGG CCGTGCGTTG AAGAAGCAAG TGATTGGGTA TGGCGAGCGA
ACGATGAATG AAATCGTGGA GGCTTATGTG AATCCGGATT TGCCCCCTGA GGAATGGGAT
TTGGATCAAC TGGTCGGCAA GGTAAAGGAA TTTATTTACT TGCTTGAAGA TCTCACCCCT
GCCCAAGTGA ATGGTTTGGG GATGGACGAG CTCAAGGCTT TTCTCCAGGA GCAATTGCGC
AATGCTTACG ACCTCAAAGA GGGTCAGATT GATCAGCAAC GTCCTGGTCT GATGCGGGAG
GCCGAGCGCT TCTTCATTCT TCAGCAAATC GATACCCTTT GGCGCGAACA TCTCCAGGCG
ATGGATGCGC TTCGGGAATC CGTTGGCCTA AGAGGCTATG GACAGAAGGA TCCGCTTATC
GAATACAAGA ATGAGGGGTA CGACATGTTC TTGGAGATGA TGACCAATAT GCGTCGCAAT
GTCATCTATT CGATGTTTAT GTTCCAGCCT GCTGCACCTC AGAACCAGAA TTGA
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| Protein sequence | MLKLLLGDPN ARKLKRYSPI VSDINLLEED ISPLSDDELR SRTSDLRQRL FNAGDLHNQI
PILDELLPEA FSIVREASKR VLGMRHFDVQ LIGGMVLHEG QIAEMKTGEG KTLVATLPSY
LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMRPEERR RNYACDITYA
TNSELGFDYL RDNMAADISE VVQREFQFCV IDEVDSILID EARTPLIISG QVEREQEKYQ
QAAQLAASLE RSAEMGKDGI DPEGDYEVDE KQRSCTLTDE GFAKAEQTLG VQDLFDPQDP
WAHYITNALK AKELFVKDVN YIVRDDEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKESLQI
QPETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY KLQTTIVPTN RIRARQDWAD
QVYKTEVAKW RAVANETADI HKKARPVLVG TTSVEKSELL SSLLTEQDIP HNLLNAKPEN
VERESEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLS RLVKPEDGPL
PSLPVQDSAT ASGFSEASAT VAPRVSASLY PCELSGPTDQ LLAQLARDLV KAWGDRALSV
LDLEERIATA AEKAPTDDAQ IQSLREAIAF VRGEYDAVVK EEEARVRDAG GLHVIGTERH
ESRRVDNQLR GRAGRQGDPG STRFFLSLGD NLLRIFGGER VAGLMNAFRV EEDMPIESGM
LTRSLEGAQK KVETYYYDIR KQVFEYDEVM NNQRRAVYSE RRRVLDGRAL KKQVIGYGER
TMNEIVEAYV NPDLPPEEWD LDQLVGKVKE FIYLLEDLTP AQVNGLGMDE LKAFLQEQLR
NAYDLKEGQI DQQRPGLMRE AERFFILQQI DTLWREHLQA MDALRESVGL RGYGQKDPLI
EYKNEGYDMF LEMMTNMRRN VIYSMFMFQP AAPQNQN
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