| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0096 |
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| Symbol | |
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| ID | 3744049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 95180 |
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| End bp | 96463 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637770262 |
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| Product | spore coat polysaccharide biosynthesis protein spsC |
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| Protein accession | YP_376114 |
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| Protein GI | 78183680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATT CTTCAGAACT TGCTATTAAT GGCGGATCAC CAATTATAAC TCCCTCGCAT
AGTTTTTTGC CTTATAATAC TATTGGGCAT GAAGAGAAAT GTGCAGTAAA TGATGTCTTG
AAAAGTGGAA ATCTTTCAGG GTTTGTTGCA TCGTCGGGCA AACAATTTTT CGGAGGTCCC
CAGGTTCAAC TTTTTGAGAA CGATCTTCGA ACCTTTTTTA ATGTTAAACA TGCAATTACA
GTCAATTCTT GGACCTCTGG CCTAATTGTC ATGCTCGGAG CTCTTGGTCT TGAGCCTGGT
GACGAAGTTA TCACTACACC TTGGACCATG TGTGCTACTG CTACAGCAAT ACTGCACTGG
AATGCAATCC CTATATTTGC AGATATTAAT TCTAAAACAT TTTTGCTGGA TCTAGATCTA
GTAGAGTCTT TAATTAGTAC TCGTACTAAG GCAATTTTAG CTGTTGATAT ATTCGGTCAA
TCTTGCGATA TGGATAAATT GAAGTATTTA CAGGATAAAT ATAATGTTTT TATTGTTTCT
GACTCTGCAC AAGCACCATA TGCTCAGCAA AATCAAAGAT TTGCTGGCAC TCTTGGTGAT
TGTGGTGGTT TCAGTTTTAA TTATCATAAG CATATCCATA CCGGTGAAGG GGGTGCAATA
GTAACTAATA ATTCAGAGAT TGCTCTTAGA TGTCAGCTTA TTCGCAACCA TGCTGAAGCT
GCTGTTGAAT CGATGAATAT ACACAATCTC TCTAATATGA TTGGCTACAA TTTTAGACTT
GGTGAGATGG AGTCTGCCAT TGGCATTCAG CAACTTAAGA AATTACCTTC CCTTGTTAAA
AATCGTCAAT TAATAGCCTC ACGATTAATA GATGGTCTTC GTAATTTAAA GGGTTTGATC
CTACCAGAAC TTCTTGATTC TAATACGCAT GTCTTTTATA TATTACCGCT CTCTCTTGAA
TTATCGATGT TGTCCTGTAC TAGATCCGAT TTGGTTGAGG CTTTGAGGTT TGAGGGTGTT
CCAGGGCTGG AAGAAGGCTA CTGTAATATT CATCTCTTAC CTTTATTTCA GCAACGAATC
GCTTATGGCT CTAAAGGATT TCCTTGGTCT TCACCTGATA TCTGTTCCCA TGTTCCAAAT
TATGAGAAAG GTTTATGTCC TGTTGCAGAA TACCTTCATG ATTCAAGCTT TTTCATGATT
GAGCTTTGTC TCTATTCTTT TACAGATTAT GATGTAGATT TAATTATAGA AGCTTTTCAT
AAGGTTTGGT CTAATTTGAC ATAA
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| Protein sequence | MNNSSELAIN GGSPIITPSH SFLPYNTIGH EEKCAVNDVL KSGNLSGFVA SSGKQFFGGP
QVQLFENDLR TFFNVKHAIT VNSWTSGLIV MLGALGLEPG DEVITTPWTM CATATAILHW
NAIPIFADIN SKTFLLDLDL VESLISTRTK AILAVDIFGQ SCDMDKLKYL QDKYNVFIVS
DSAQAPYAQQ NQRFAGTLGD CGGFSFNYHK HIHTGEGGAI VTNNSEIALR CQLIRNHAEA
AVESMNIHNL SNMIGYNFRL GEMESAIGIQ QLKKLPSLVK NRQLIASRLI DGLRNLKGLI
LPELLDSNTH VFYILPLSLE LSMLSCTRSD LVEALRFEGV PGLEEGYCNI HLLPLFQQRI
AYGSKGFPWS SPDICSHVPN YEKGLCPVAE YLHDSSFFMI ELCLYSFTDY DVDLIIEAFH
KVWSNLT
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