Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0093 |
Symbol | |
ID | 3744046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 92586 |
End bp | 93320 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637770259 |
Product | hypothetical protein |
Protein accession | YP_376111 |
Protein GI | 78183677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.049709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG GCGCCATTAT TGAGGCTAGA ATGGCTTCCA CAAGATTACC TGGCAAAGTT CTTATTCCAA TCGAAAAGAA ACTTGTCATT GAGCACCTAT TTGATAGATT GCGCCATGTA TCTCTTTTGG ATGATATTAT TGTCGCAACA ACTACAAATA AACTTGACGA TCAGATTGAA GATGTTTGTA GATGCAATGA TGTCAACTTC TATCGCGGCA GTGAAGAAGA TGTTATGTCC CGTGTATACG AAGCGTCAAA ACATTTTCAT GTCGATATAA TCGTTTCTAT AACTGCTGAT TGTCCGTTGC TAGATCCTGA GATTGTATCT CAATGCATAA GCTTATTTGT GAATAATATT TGTGATTATG CAAGTAATAC TGATGTTAGG TCTTTTCCTG ATGGAATGGA TGTGCAAGTA TATTATCGTA CAACTTTAGA GAACTCCCTT CGTCTTACAG ACGATATACT TGATCATGAA CATGTAACAC TACATATTCG TAAACATCCT GAGTTATTTT CTATAATTCA CTTCGTTGCT CCGCCTTCTT TGACATGGCC AGAATTAGCT GTTACTTTAG ACGAAATACC CGATTTACAA CTTATTGAAA TATTGATAAA AAGACTTGGG ACTTGTAATT CAATATTTGG ATGCAGAGAA ATTATTGAGC TGATTAGGAG TGATATGCAG CTCTATGAAC TTAATTCAGA TGTTAAGAGA AAGGGTGATA CATAA
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Protein sequence | MKIGAIIEAR MASTRLPGKV LIPIEKKLVI EHLFDRLRHV SLLDDIIVAT TTNKLDDQIE DVCRCNDVNF YRGSEEDVMS RVYEASKHFH VDIIVSITAD CPLLDPEIVS QCISLFVNNI CDYASNTDVR SFPDGMDVQV YYRTTLENSL RLTDDILDHE HVTLHIRKHP ELFSIIHFVA PPSLTWPELA VTLDEIPDLQ LIEILIKRLG TCNSIFGCRE IIELIRSDMQ LYELNSDVKR KGDT
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