Gene Syncc9902_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0088 
Symbol 
ID3744041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp87350 
End bp88222 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content30% 
IMG OID637770254 
Producthypothetical protein 
Protein accessionYP_376106 
Protein GI78183672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.439956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATTAG TAATGTGTCG ATTAACCGTT TGTAGAAAAA TGTTAAATCC TATATTAGAT 
GACATGTTTT TAGGGATAGT ACATTATACA AAATTATTGA GTCGAAAGAA AAACATATCT
ATTCTTGCTG AAAGCCTACT CTATAAAGAC TATATGATCT CTATTGAACA GGAAGTTGAC
AATAAATCGG CTTTGAATTT AGATAATTTA AAAAAACAGA CCCTCTCGCA AACAAATGAT
ATCAGAGATT TACTATATAA AAATCTTGCG ACAATCAATT TCTTTGAATG TACGTATATC
GAGCAATTAT ACCAACAAGA TTGGAAACTC GAATTGATAA AAAAACATCT AAATGGTATA
GATTGGGGGA AAATAGCACT AAATAGTTTG TCGCATAAGA ATATTGATCT AACACATCAG
CATTATGCTA TATTTGAAGC CTTTTTAAGA AGCAATTGTA ATTACTGTTT GGTTTTAGAA
GATGATTCTT ATATAAACAC AGGAATATCA CATATCAACG AAAGTCTTTA TCAGGTAGTT
GAACATGCTG AAAATAATTT ATATAATGAA CCATTCTTTA TTGATCTCAG TCAATCACTT
GGTATTAAGC CACTCAATAA ACCACCAGAT ACTTATATTT GGCAAGCTAC ACCGGGATTT
TCGCAATGCA CATCTGCATA CATGATAAAT AGAAATTGCT CACAAAAATT CCTAAAAGAA
TCAAAAACAA AGGTTTTACC AATTGACTGG CATATAAGCA GAATAATGAA GAAAAATAAT
ATTTTGTGTT ATAGTGTATG GGAATCTCTG TTTTTGCAAG GATCTATGAC AGAAGTTTAT
CGAAGCAATT CACAATATAG GGCTAATGAT TAG
 
Protein sequence
MILVMCRLTV CRKMLNPILD DMFLGIVHYT KLLSRKKNIS ILAESLLYKD YMISIEQEVD 
NKSALNLDNL KKQTLSQTND IRDLLYKNLA TINFFECTYI EQLYQQDWKL ELIKKHLNGI
DWGKIALNSL SHKNIDLTHQ HYAIFEAFLR SNCNYCLVLE DDSYINTGIS HINESLYQVV
EHAENNLYNE PFFIDLSQSL GIKPLNKPPD TYIWQATPGF SQCTSAYMIN RNCSQKFLKE
SKTKVLPIDW HISRIMKKNN ILCYSVWESL FLQGSMTEVY RSNSQYRAND