Gene Syncc9902_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0087 
Symbol 
ID3744040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp86464 
End bp87384 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content31% 
IMG OID637770253 
Producthypothetical protein 
Protein accessionYP_376105 
Protein GI78183671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.204422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAAATAATTC AATGCAGAGG ATAACTTCAC CATTAATGCA TGAAAATGTT 
CAGTTGATAA CTGATATAAA TTTAGCTAAT CGACAAAAAA CTCAAAAAAT AAATATTGTA
GGCAACGGAC CTTCACTTTT AAGTAGTTTT GATCTACTAG ATCAAAGCAA CGATACTTTG
GGCTTTAGTG CTTTGATCTA TAGTAAAATA AAGTTGCGAT ACTTTATATT TGAGCCATTA
TTTGCCCTTA ATAATGATGA TAAAGAGAGT TCAGAGTTCA AGAGGGTCAA TAATTTATTG
GATACTATAT TCTGTTCACA AATAGGATCA ATAATTGACA AGCATGAGGC TACAGACGTG
ACATACTTCG TAAATAATCA GGTCATTACT AATCAATATG GATATATATC CTTCCCAAAG
AAGAAAAAAC TGTATCTCCC TACGTATTTT TATATTAATG AATCTACTGA TTCGGCAATG
CTTTATTGTC TTAAAAAGTA TATCGAAAGT AAAACTTCAG ACCCATTAAA TTTCCGAGGC
AGCATGAATA GAGCTATCTC AATTGCCTAT TTAATGAATT ATCAATGCAT AAATATTTTT
GGTCTAGACC CAAGTACACC CCTTTCTTGG TATCACGAAG ACGAAAGAGA CAAAATCTTA
CAAAAGGAGA TTGTAGTAAC CGACTATTTT AATGCTTGGC GAGACATGCG CATTAAAAAT
CTAAAAGAGT TTGATGTTAG AAAATCCGAA TTTAGTCTAA TTAAAAGCTT ATTTTATACA
ATATATGTAA TGAATAAGCT ATTCAAAGCA AAAGGTTTAA ATATTCCAAA GATTAACATT
GTAACCTCTG ATCCTATCGT TATAAATTGC TGTTCCTTCT TTTGCGGTGA TATTAGTAAT
GTGTCGATTA ACCGTTTGTA G
 
Protein sequence
MKIKNNSMQR ITSPLMHENV QLITDINLAN RQKTQKINIV GNGPSLLSSF DLLDQSNDTL 
GFSALIYSKI KLRYFIFEPL FALNNDDKES SEFKRVNNLL DTIFCSQIGS IIDKHEATDV
TYFVNNQVIT NQYGYISFPK KKKLYLPTYF YINESTDSAM LYCLKKYIES KTSDPLNFRG
SMNRAISIAY LMNYQCINIF GLDPSTPLSW YHEDERDKIL QKEIVVTDYF NAWRDMRIKN
LKEFDVRKSE FSLIKSLFYT IYVMNKLFKA KGLNIPKINI VTSDPIVINC CSFFCGDISN
VSINRL