| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0048 |
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| Symbol | |
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| ID | 3744079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 46106 |
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| End bp | 47254 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637770214 |
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| Product | SqdX |
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| Protein accession | YP_376066 |
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| Protein GI | 78183632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATCG CCTTTTTCAC CGAAACCTTC CTCCCCAAAG TCGATGGCAT CGTCACTCGA
CTCACCAAAA CGGTGAAACA CCTGGTGGAT GCGGGTGATG AGGTGGTGGT GTTTTGCCCT
GAAGGCTGTC CAGATGAGTA CATGGGCGCT CGCTTAATCG GCGTTCCGGC AATGCCTTTG
CCGCTTTACC CCGAGCTCAA GTTGGCCTTG CCGCGGCCCG CCGTGTCGGA AGCCATTGAC
ACGTTCGAAC CGGACCTCAT TCATGTGGTG AACCCTGCTG TGCTGGGGCT GGGCGGAATC
TGGTTGGCCA AGACAAAAAA TATTCCGTTA ATCGCCAGTT ATCACACCCA TCTTCCGAAA
TATCTTGAGC ACTACGGCAT GGGGATGCTC GAACCCTTGC TGTGGGAATT GCTCAAGGCC
GCTCACAACC AGGCCCTGCT CAACCTGTGC ACCTCAACGG CGATGGTGCA AGAACTCAGC
GATAAAGGCA TCCAACACAC AGCGCTCTGG CAACGCGGAG TCGATACGGA GCTCTTCCGT
CCGGCCCTAA GAAGCAATGC GATGCGGCAC CGTTTGCTGG GAGGCCATGA CGATCGTGGC
GCCCTGCTGC TCTACGTCGG TCGACTATCA GCAGAGAAGC AAATCGAACG CATTCGTCCG
GTGCTGGAAG CTCTACCTGA TACCCGCCTT GCTCTTGTGG GCGATGGACC CCATCGGCAA
CAACTGGAAA AGCACTTTGC GGGCACAGCC ACCACCTTTG TGGGTTATTT GGCAGGCGAA
GACCTAGCGA GCGCTTACGC CTGTGGTGAT GCTTTTCTCT TCCCCTCGAG TACTGAAACC
CTCGGACTCG TGCTCCTTGA GGCCATGGCG GCCGGATGTC CCGTGGTCGG TGCGAACCGA
GGAGGCATCC CCGACATCAT TACTGACGGC GTCAACGGCT GTTTGTACGA ACCGGATGGG
GAGGACGGCG GAGCCGCAAG CTTGATTGAG GCCACACAAC GGTTGCTAGG CAACGACTTA
GAGCGTCAGT CGTTGCGAAG TGCTGCACGA TCCGAAGCCG AGCGCTGGGG CTGGGCTGGC
GCCACAGAAC AACTACGGGG CTATTACCGC GACGTCCTCA GCCAAGGGAC GCTGGACGCT
GCTGCCTGA
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| Protein sequence | MKIAFFTETF LPKVDGIVTR LTKTVKHLVD AGDEVVVFCP EGCPDEYMGA RLIGVPAMPL
PLYPELKLAL PRPAVSEAID TFEPDLIHVV NPAVLGLGGI WLAKTKNIPL IASYHTHLPK
YLEHYGMGML EPLLWELLKA AHNQALLNLC TSTAMVQELS DKGIQHTALW QRGVDTELFR
PALRSNAMRH RLLGGHDDRG ALLLYVGRLS AEKQIERIRP VLEALPDTRL ALVGDGPHRQ
QLEKHFAGTA TTFVGYLAGE DLASAYACGD AFLFPSSTET LGLVLLEAMA AGCPVVGANR
GGIPDIITDG VNGCLYEPDG EDGGAASLIE ATQRLLGNDL ERQSLRSAAR SEAERWGWAG
ATEQLRGYYR DVLSQGTLDA AA
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