Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0025 |
Symbol | murC |
ID | 3743166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 24961 |
End bp | 26367 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637770191 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_376043 |
Protein GI | 78183609 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCACGCC TGCTCACGCC CCAAACACCT GTTCATTTCA TCGGTGTAGG CGGTATTGGG ATGTCGGCGC TGGCAAAAAT TTTGGTAGAC CGCGGCCACC CAGTCAGCGG TTCGGACCCC CGTGACAACC CCACGGTTCA GCATCTTGAA AGTCGAGGCG TCACCGTTTT TAAAGAGCAA ACCGCTGAAT GCATTCAATC GGTGCTCGCC ACAAATCAGC AGCCACCGGT GGTGGTGATC AGCACAGCAA TTCCAGACAC CAATCCCGAG TTAGAAAACG CCCGCGCGCA TCAGCTGGCG ATCTGGCATC GATCGGATCT CCTGGCTGCC CTGATCGATC AACAAGCCTC GATTGCTGTG GCGGGGAGTC ACGGAAAAAC AACCACCAGC ACACTGATCA CCACCTTGCT GATCGAAGCC GGTGAAGATC CCACCGCCGT GATTGGTGGG GTTGTTCCAT GCCTTGGCAG CAACGGTCAT TCCGGTCAAG GTCGGTTGTT GGTAGCCGAA GCAGACGAAT CCGACGGATC GCTCGTGAAG TTCAGGCCCA GCCTTGGGGT GATCACCAAC CTGGAACTCG ATCACACCGA CCATTACGAC GGCTTGGATG ATCTGATCTC AACCCTGCAA CGTTTTGGTG GGGGTTGCGA ACGGTTGATC GCGAACTACG ACGACCCAAT CCTTCAGGAG CATTTTGAGC CGACAGCCTG GTGGTCGAAC AAGCAAAGCG AGAACATTGC CTTCGCAGCT TTGCCACTGC AACTTGATGG CGATCGATGT ACGGCGCGGT TTTACGAGAA CGGCTCTGCA GTGGGTGACT TCACCTTGCC GATGGCTGGT CTCCACAATT TGAGCAACGC CACGGCTGCC TTAGCGGCTT GCCGGATGGA AGGTATTCCG TTTGAAGCGT TGGTCGAAGG CCTGGCTCAA CTCCAAGCCC CTGGCCGCCG CTTTGATCTA AGGGGCACCT GGGAGGGGCG GCACATCGTT GATGACTACG CCCACCATCC CAGCGAAGTG CGCGCGACGT TGACGATGGC GCAACTCATG GTGAGCAGTG GGCGCAGTCC GCTTCCATCA CCACCACAAC GACTCGTGGC CGTGTTTCAA CCACACCGTT TCAGTCGCAC CCAACAATTT TTTGAAGCCT TTGCCGAAGC ACTTCAAAAC TGTGACGCAC TCCTTCTTGC TCCGGTTTAT GCGGCCGGTG AACAAACAAT TCCTGGCGTT TGCAGCAACG CGCTCGCCCA ACGCATCCGA TCGTTGCGAC CAGACCTCGA AATCGAGGTT GCGGAGAATC TCAATCAGCT CACCGATCTG GTGAAGCAAC GCAGCCGGCC TGATGACCTT GTGCTCGCCA TGGGAGCTGG CACCGTGAAC AGCCTCTGGG GACGACTGAC CGAATGA
|
Protein sequence | MPRLLTPQTP VHFIGVGGIG MSALAKILVD RGHPVSGSDP RDNPTVQHLE SRGVTVFKEQ TAECIQSVLA TNQQPPVVVI STAIPDTNPE LENARAHQLA IWHRSDLLAA LIDQQASIAV AGSHGKTTTS TLITTLLIEA GEDPTAVIGG VVPCLGSNGH SGQGRLLVAE ADESDGSLVK FRPSLGVITN LELDHTDHYD GLDDLISTLQ RFGGGCERLI ANYDDPILQE HFEPTAWWSN KQSENIAFAA LPLQLDGDRC TARFYENGSA VGDFTLPMAG LHNLSNATAA LAACRMEGIP FEALVEGLAQ LQAPGRRFDL RGTWEGRHIV DDYAHHPSEV RATLTMAQLM VSSGRSPLPS PPQRLVAVFQ PHRFSRTQQF FEAFAEALQN CDALLLAPVY AAGEQTIPGV CSNALAQRIR SLRPDLEIEV AENLNQLTDL VKQRSRPDDL VLAMGAGTVN SLWGRLTE
|
| |