Gene Syncc9902_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0017 
Symbol 
ID3743139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp19264 
End bp20481 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content60% 
IMG OID637770182 
Producthypothetical protein 
Protein accessionYP_376035 
Protein GI78183601 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGATTG GTGGTGGCGC CGCTGGATTT ATGGCCGCCA TCACCGCTGC TGAGCAGGGA 
GTCCAGAGCG TGCTCGTGCT GGAGGGCACC CCAGAGCTCC TCAACAAAGT TCGAATCAGT
GGTGGTGGTC GCTGCAACGT CACCCACGCC TGTTGGGATC CGGCTGAACT TGTGGGTCAT
TACCCCCGCG GTCAGAGGGC ATTGCGAGGA ATGTTCAGTC GGTTTGCTGC AGGAGATGCC
ATCGCTTGGT TTGCGGATCG AGGTTTGGTT CTCATTGAGG AGGCTGATGG TCGGATGTTT
CCGCAGCAGA ACCGTTCGGA GGCGGTGATT CAGTGCCTGA AGCAGGCTGC TCTGACGGCT
GGTGTGCAGG TGCAAACGCG GGTGATGGTG CAGCGTTTAT CAGCGCAGTT AGAGGGCGGT
TTTGTAGTGG GTGGCCGCGG CTTGGATCAG CCGTTGTTAG CTCAAAAGGT GATGTTGGCC
ACTGGCGGCC ATCCCAGCGG CAGGAAGATG GCCGAAAACC TTGGTCATCA GCTCGTTCCA
CCGGTCCCAT CGTTGTTCAG CCTTTCGCTG AACGCGTCCG TTTTGGCGGC TTGCAGCGGT
ATTGCTGTGG ATGATGTCGG CTTGGACCTG AAGCTCAACG ACCAGCGCTT CCGGCACGTC
GGACGCGTGT TGATCACCCA CCGCGGACTG AGTGGTCCTG CCACCCTTCG ACTTTCTGCG
TTTGCTGCTC GCGCCTTGCA TGGGAGTCGC TATCGGGGAG AACTCAGGGT GGATTGGAGT
GCTGGCCTGG GGCGCTCTGG GGTGGAGCAA CGTTTGCAGC AGTGGCGACA GGTGGAAGCG
CGTCGCAGTG TGGGCGCCGC TAAGCCGTTT GATCACCTTC CCAGGCGGCT TTGGCAGGCA
TTTTTGAACT TGGCTGGAGT GGATGGGGAA GGCCGTTGGG CCGACTTTTC CGCCAAAGCG
CAGCGCAAGT TGATCGAGAT TCTCTGCGCT CAGTGTTTAC CGATCGTGGG GCGTGGTCCC
TTTGGCGAGG AGTTCGTGAC CGCCGGTGGA GTGGCTCTTG GCGATGTGAA TCTTGCAACA
ATGGAAAGCC GGCGCTGTCC TGGGCTGTTC ATCGCTGGAG AGTTGCTGGA TGTGGATGGA
GTGACCGGGG GGTTTAACTT CCAGGCCTGC TGGAGTGGTG GTTGGTTGGC AGGCCAGGCC
ATTGCCAAGG CAGATTGA
 
Protein sequence
MVIGGGAAGF MAAITAAEQG VQSVLVLEGT PELLNKVRIS GGGRCNVTHA CWDPAELVGH 
YPRGQRALRG MFSRFAAGDA IAWFADRGLV LIEEADGRMF PQQNRSEAVI QCLKQAALTA
GVQVQTRVMV QRLSAQLEGG FVVGGRGLDQ PLLAQKVMLA TGGHPSGRKM AENLGHQLVP
PVPSLFSLSL NASVLAACSG IAVDDVGLDL KLNDQRFRHV GRVLITHRGL SGPATLRLSA
FAARALHGSR YRGELRVDWS AGLGRSGVEQ RLQQWRQVEA RRSVGAAKPF DHLPRRLWQA
FLNLAGVDGE GRWADFSAKA QRKLIEILCA QCLPIVGRGP FGEEFVTAGG VALGDVNLAT
MESRRCPGLF IAGELLDVDG VTGGFNFQAC WSGGWLAGQA IAKAD