Gene Syncc9902_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0016 
Symbol 
ID3743138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp18735 
End bp19241 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID637770181 
Productmethionine sulfoxide reductase B 
Protein accessionYP_376034 
Protein GI78183600 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.226802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA GTTCGGCTGT TCTGTCCCGT CGTTCATTGA TGTTTGCTGC ACTAGCTGGT 
GTTTTTGGGA GTCTGTGGCG GCCCAAAACG GTTCTAGCGG CCTCAAAGGC CAATGATCCT
CAGTGGGATC TCAGCCCAGA GGTTTGGCGA GAGCGTCTAT CCCCCCAAGC CTTTGACGTC
CTCCGTAACG AGGGCACTGA GCGTCCGTTT ACGAGTCCTT TAAATGATGA AAAACGCAGC
GGTAATTACC ACTGCGCCGG ATGCGATTTG GCGTTGTTTT CATCGGAGGG AAAGTTTGAT
AGCGGAACGG GTTGGCCCAG TTTTTGGCAA CCACTCAGCG AAGCGATCGA GACGAAAGTA
GATTTCAAAT TGATTGTCCC GCGCACGGAA TATCACTGTT CGCGCTGCGG TGGACATCAG
GGCCATGTGT TTAATGACGG ACCCCGACCA ACTGGAAAGC GTTACTGCAA CAACGGAGTC
GCCCTCGTCT TCCGCCCTGC AACCTGA
 
Protein sequence
MTNSSAVLSR RSLMFAALAG VFGSLWRPKT VLAASKANDP QWDLSPEVWR ERLSPQAFDV 
LRNEGTERPF TSPLNDEKRS GNYHCAGCDL ALFSSEGKFD SGTGWPSFWQ PLSEAIETKV
DFKLIVPRTE YHCSRCGGHQ GHVFNDGPRP TGKRYCNNGV ALVFRPAT