| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1977 |
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| Symbol | dapF |
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| ID | 3744946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | + |
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| Start bp | 2202687 |
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| End bp | 2203493 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637770007 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_375862 |
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| Protein GI | 78187819 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00347642 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAG AGATCCCATT CAGCAAACTG TCCGGTGCAG GCAACGACTT CATCATCATG
GACAACCGTG ACCGCTCCAT CACCCTTGAG GCTTCGGCCA TCCGTGCGCT CTGCACACGC
CGTACCGGCA TCGGCGCCGA CGGGCTCATC CTCATCGAGC CGTCAGAAAC AGCATCATTC
AGCATGCTCT ATCACAACGC CGATGGTCTG CCCGGCACGA TGTGCGGCAA CGGAGGCCGC
TGCGCGGTCT GGTTCGCCAG GAGCATCGGG GTGCAGCCGG ACGCCGGGGG GTGCTTCCGT
TTTGAGGCAA ACGGCGACCC CTATCAGGCA TGGGTGAGCG GACCCGAAAC GGTACGGCTC
CGGATGCGCG AGCCACGGGG CATAAGGGAC GAAATCGATC TCGGCGGTCA GTACTGTGCC
TTTATTGATA CCGGCTCGCC GCACGCCGTG ATCCGCACCG AAGGGCTTGA TGCCGTGGAT
GTGGTCGGGG AGGGCCGCGC CATTCGCCAC CGCACCGACA TCTTCCCCGG CGGCACCAAT
GTCAATTTCA TCGAAGTGAC CGCCACCGAC AGCATCGACC TCAGAACCTT CGAGCGGGGC
GTCGAAGATG AGACCCTCGC ATGCGGAACC GGAGCGGTCG CAGCCGCACT TCTCAGCCGC
CGCCTCGGCA TGACCTCAGC CGACAGCATC AGGGTCCGGG TGAAAAGCGG TGACATGCTC
AACGTGACGT TCAGCGAAGA TATGCGGGAG GTCTATCTCA CCGGACCGGC GGTCATCGTC
TATACCGGCG TGGTGAAAGC AGGCTGA
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| Protein sequence | MRREIPFSKL SGAGNDFIIM DNRDRSITLE ASAIRALCTR RTGIGADGLI LIEPSETASF
SMLYHNADGL PGTMCGNGGR CAVWFARSIG VQPDAGGCFR FEANGDPYQA WVSGPETVRL
RMREPRGIRD EIDLGGQYCA FIDTGSPHAV IRTEGLDAVD VVGEGRAIRH RTDIFPGGTN
VNFIEVTATD SIDLRTFERG VEDETLACGT GAVAAALLSR RLGMTSADSI RVRVKSGDML
NVTFSEDMRE VYLTGPAVIV YTGVVKAG
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