Gene Plut_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1945 
Symbol 
ID3744437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp2160155 
End bp2162413 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content60% 
IMG OID637769971 
Productpenicillin-binding protein 1A 
Protein accessionYP_375830 
Protein GI78187787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.419198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAA CAATTTCAAG ACTGAACCTG AACGTGTACA CCTCATTATC CAGACTCTTC 
GTCATTCTCT CTCTTTCTTT AGCCGCCATC GCCTCGAACC CGCCCGAAGC CCGGGCAGGC
TCCTCCATTC TCGGCCTGCC GAGCCTTGAG GAGCTCGAAA ACCCGAACCC GGACCTCGCA
TCCCTCGTCT ATTCAGAGGA CGGTGTGCTC CTCCACAAGT TCTTCCTGAA GAACCGGACC
TTCGTCCCCC TGCGTACGAT TCCGATGTCG GTCCGCAATG CGCTGATCGC CACCGAGGAT
GTGGAGTTCT ACCGCCATTG GGGCGTCGAC ATGCGCCGTC TGGTGCTCGC CATGGGCGAA
AACATCCTGA AGGGCCGAAC CCGCTGGCAC GGAGCGAGCA CCATCACCCA GCAGCTGGCC
AAGAACCTCT TCCTGAGCCA GGAACGGACC GTCACGCGCA AGATGAAGGA GTTCGTCACG
GCCGTCGAGC TTGAGAAAAC CTACACGAAA AACGAGATCC TCGCCCTCTA TCTCAACACC
GTCTACTTTG GATCGGGAGC ATACGGGGTC GAAGCTGCGT CGCGGACATA CTTCGGCAAG
CCTGCAAGCC AGCTGAATCT GCCGGAGAGC GCAACCCTCA TCGCAACCCT GAAAAACCCG
ACCGCCTACA ACCCGGCAAA AAACCCGGCT GGTTCCATCG GCAGACGGAA CCTGATCCTT
TCTCTGATGG CAAAGGAAAA GTTCATCACC GAAGCACAGG CCGCCAAGGC AAAACAGGCA
CGGCTGGTCC TCAAGTACAC CCCTGCGACC CATCACGGCG CAGCGCCGTA TTTCACCGAG
TACATCCGCC AGACCGTTAA ACCTGCTTCG ATGCTCGGCG ACGTCAACCT CTACCGTGAC
GGGCTGACCA TACAGACCAC CCTCGACAGC CGAATGCAGA AGTATGCCGA AGCGGCGGCC
AGAGAGCACC TGGCAACCCT GCAGGCAACA TTCGACCAGT CGTGGCGCTG GACTGAACCG
CTGAAGAACC AGCTCATCCG TGAAAGCGCA CGCTACAAGG AAATGCGCGA GGAAGACGGT
CTCACCGACG CCGCAGCCAT GGCAAAGCTC AAGAGGGACC GGGTATGGCT CAACGGCCTG
CTCCGCGACA AGACCCGCAT TCAGGTCGCG CTTGTAGCCA TAGACCCCTC CAACGGTCAC
GTGAAAGCCT GGGTCGGCGG CAACCAGTTC GCCTCCGAGG ACTACAAGTA CCAGTTCGAC
CATATCTGGC AGGCGCGCCG CCAGCCCGGC TCGACCTTCA AGCCGTTCGT CTACACCGCA
GCGATAGACA AGGGCATCCC CGCCAACTTC CAGGTGCTCG ACAAGCCCCT CTCGCTGCAA
AGCGGAGGCG GCATATGGTC GCCCCGGAAC TCGGACGGAT CCTCGGGTGG ATGGACCACC
CTGCGCTCGG CCATTGCCCG CTCACTGAAC CAGGTGACGG TGCGCCTTGC CTATGAGCAG
CTCAGCACCG CCGACATCAT CAGCTATGCC CGCAGGATGG GCATCTCTTC GCCCATCCCA
TCGAACCTCT CCATCGCACT CGGCACCGCC GAAGTGTCTC CGCTTGAACT GGCAGGGGCA
TTCTCGACCT TCGCCAACAA CGGGGTATGG AACCAGCCGG TATCCATACT GAGGGTCGAG
GACAAGAACC ACCATCTCAT CTCCGAATAC GTGCCGAACA GCCGCTTCGC CATCGACTCC
ACCACCAACT TCGTGATGGT CTCGATGCTG AAGGACGTCA TCAATAAAGG CACCGGCATC
GCAGTCCGCG CCCGCTACGG CCTTGAAATG GAAGCCGCCG GAAAGACCGG CACCACCCAG
AGCCTCCGCG ACGCATGGTT CGCCGGCTTC ACCCCTCAGC TGGTCGCAGT GGTCTGGACC
GGGTTCGACG ACGAACGCAT CAAGTTCACC TCCATGGAGT ACGGCCAGGG CGCACGCGCC
TCACTGCCCA TCTGGGCCGG CTTCATGAAG CGCTGCTATG CCGATCCGTC ACTCGGCCTT
GAGAACCGCT ATTTCCGCAT CCCGGAAAAT GTCATCGCAG TGCCGATATC CTCGACGTCC
AACCGGCCCT CCGACCTGTT CGACAGCGAT GTCTACATCG AGTACTTCAC CCCGAAAGGG
TTCCAGAACT ACCAGCAGCA TCCCGAACGG ACAGAAAACG CCGTGCCGGA CACATCAAGA
GGCCCTGCGG CTGTTCCCGC TGAACAGCCT TCATTTTAA
 
Protein sequence
MDATISRLNL NVYTSLSRLF VILSLSLAAI ASNPPEARAG SSILGLPSLE ELENPNPDLA 
SLVYSEDGVL LHKFFLKNRT FVPLRTIPMS VRNALIATED VEFYRHWGVD MRRLVLAMGE
NILKGRTRWH GASTITQQLA KNLFLSQERT VTRKMKEFVT AVELEKTYTK NEILALYLNT
VYFGSGAYGV EAASRTYFGK PASQLNLPES ATLIATLKNP TAYNPAKNPA GSIGRRNLIL
SLMAKEKFIT EAQAAKAKQA RLVLKYTPAT HHGAAPYFTE YIRQTVKPAS MLGDVNLYRD
GLTIQTTLDS RMQKYAEAAA REHLATLQAT FDQSWRWTEP LKNQLIRESA RYKEMREEDG
LTDAAAMAKL KRDRVWLNGL LRDKTRIQVA LVAIDPSNGH VKAWVGGNQF ASEDYKYQFD
HIWQARRQPG STFKPFVYTA AIDKGIPANF QVLDKPLSLQ SGGGIWSPRN SDGSSGGWTT
LRSAIARSLN QVTVRLAYEQ LSTADIISYA RRMGISSPIP SNLSIALGTA EVSPLELAGA
FSTFANNGVW NQPVSILRVE DKNHHLISEY VPNSRFAIDS TTNFVMVSML KDVINKGTGI
AVRARYGLEM EAAGKTGTTQ SLRDAWFAGF TPQLVAVVWT GFDDERIKFT SMEYGQGARA
SLPIWAGFMK RCYADPSLGL ENRYFRIPEN VIAVPISSTS NRPSDLFDSD VYIEYFTPKG
FQNYQQHPER TENAVPDTSR GPAAVPAEQP SF