| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1252 |
|---|
| Symbol | |
|---|
| ID | 3745176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1414476 |
|---|
| End bp | 1415138 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637769288 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_375157 |
|---|
| Protein GI | 78187114 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCA AGGCGGTCAT CTTCGACCTT GACGGGACCC TGCTCGATAC CCTCAAGGAC
CTCTCCGTCA CCCTCAATGC CGTGCTCTCG GCAAACGGCC ACCCCACCCA TCCGCTCGAA
CACTGCCGCT ACCTTGTCGG CAGCGGCATG CGCGAACTCG TCCGCAAAGC CCTTCCCGAC
GGAGTCGGCA CACCCGACAC CATCGAGAGG ATCCTCGGGG AACTTCTGGA GCAGTACGCA
CTCAACTGGA ACGTGCACTC GCAGCCCTAC CCGGGCATTC CGGGAATGCT CGACGGGCTG
GAGCGGCTTG GAATGAAAAA AGCCATTCTC TCCAACAAGG CCGACCGGTT TACGAAGCTC
TGTGCCCGGC ATCTTCTTGC AGACTGGCAT TTCGATGTTG TCATGGGCCA CCATGACGCA
ATCGAGCACA AGCCCTCACC CGAAGGGGCG CTCCTCGTAG CGGAAATGAT GGGTGAAAAA
CCCTCTGACA TTCTCTATGT CGGCGATACC GGCATCGACA TGCTGACGGC CAACCGTGCC
GGCATGTACC CGCTTGGCGT ACTCTGGGGG TTCCGGCCTG AAGCGGAGCT GGTGGAAGCC
GGGGCACGCT CGCTTACAGC CGATCCCGAA GGGATACTAC TCCATCTGGA GGGCTGCGCC
TGA
|
|---|
| Protein sequence | MSCKAVIFDL DGTLLDTLKD LSVTLNAVLS ANGHPTHPLE HCRYLVGSGM RELVRKALPD
GVGTPDTIER ILGELLEQYA LNWNVHSQPY PGIPGMLDGL ERLGMKKAIL SNKADRFTKL
CARHLLADWH FDVVMGHHDA IEHKPSPEGA LLVAEMMGEK PSDILYVGDT GIDMLTANRA
GMYPLGVLWG FRPEAELVEA GARSLTADPE GILLHLEGCA
|
|---|
| |