Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1142 |
Symbol | |
ID | 3745884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 1295819 |
End bp | 1297771 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637769177 |
Product | TonB-dependent receptor-related protein |
Protein accession | YP_375047 |
Protein GI | 78187004 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.22175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0805488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA AAGTATTTCT CGCCGTCATG CTCGGACTGC TCTCGAGCCG GGGAGTGTTT GCAGAAGAGG CCTCTTTAAC CTACATGATG GACGAGGTTG TTGTGACCTC AAGCCGTTTC GAGGAGATGA AAAGCACCGT GACATCCAAT GTCACGATTA TCGGAAGGGC AGAGATCGAG CTTTCGTCAG CCAAGGATCT CAGCGAGCTT CTTGCGGAGA AAAGCCTTGG CCATTTTCAG AAATATCCCG GGACATTGAC TTCAATCGGC CTCAGGGGGT TTCGGAGTGA AACACATGGA AATGATTTGA TGGGAAAGGT ACTCATCCTT TTGGATGGAC GGCGTGCTGG CACCGGAAAT CTTGCAAAGA TCATGACCGA GAATGTGGAG CGTATTGAAA TTATACGCGG ACCCGCATCT GTGCAATACG GCTCTGCAGC GATTGGCGGA GTGGTGAATG TCATTACCAA AACAGGCAGT GGTGCACCCT CATTTTTTGC AGCACAGCAG GTTGGAAACA ACGAATATGT GAAGACCGGC GCTGGTGCAG AAGGGAGTAT AGGGAGGTTT GATTTTTCCG GCAGTGTTTC AACTGCAGAT ATGGGTGATT ACCAGACAGG CTCAGGTGAT ACGTATCAGA ATACTGGATT TGATGACCAG GTGATGGGAA GCCTCAGTCT GGGATATGAA TTCCTTCCGC ATCAGCGTAT GCAGGTAATC TATCATGTTT TCGATCTTGA ACGAGCTGGT TCACCCTCAT ATTTCGCTAC TCCTGATTTC GATGCCTACA CGGTTCAGAA CAATCATTCG ACCGATTTGA TGTATGAAGG CTCCGATGGC GAAGGGCGAT GGTCTTGGAT GGCTCGCTAT TACATGGGGA TGGATAAATA CGGATATGTC AGTCCCAGTT CATCCTATAT GAGCCAGAGC GATACCGATC AGCAGGGTGC TCAGGCGCAA ATCAGCTATG CAGAAGCCTC AATGAGGGTG ACGGCGGGAG TTGATTGGCT GCAGTATGAA CTTGAATCTA CTCTGGCTCC GAAATGGAGC CAGTACGAAA ATCCTGCGGC ATTCGTCCTT GGCAGATACC TTTTTTTCGA TGATGCACTC ACCCTTACCG CAGGTTTGCG GTATGATGAT TACTCTGTTG ACCTTCATGC AAATGAGGGT ACATCCCGGA ACACCGACAA TACATCCGGG CAGGCCGGCC TTGCATTCCG GATTGCCGAT GGCCTGCGTT TGAGAGGATC CTATGCCGAA GGGTTCAGAA TGCCCTCTGC CAGAGAGCTT GCCGGAGAAA TCGTTTCATA CGGAAAAACC TATATCGGAA ACGCTGAGCT GAAACCAGAA TCAAGTCTGA CATGGGAAGG GGGGATTGAC GTGGCATGGA AGCGACTTGT GGCTTCATGT ACGGTATTTA CCACTGACTA TACTGATTTG ATTGAGACCA GTGCCACAGG GGCCTCAAGT TACACGTATG TCAATGTCGG AAGTGCTACG GTTTCAGGAC TGGAGGCCGA ACTGTCCTGG CCCTTTGCTC CATTGGGCGA AAACTGGACC GTCGAACCTT TTGCAGGGTA CACTCATCTT TTCGAGTTCA AGGATGACAA GACCGGTGCG AATCTTCCGT ATACACCCGA ATGGAATGCA TCAACAGGGA TCAGGTTGCG TGATAAAGGA GGGTTTGCCG GTTCGGTGAA TGTCGCCATG ACGGGAAGTA CGATTGTCCA GGACTGGGAA AACAATAATG GCGCATTCGT CACCAAGGGA AGCTTTGCGG TGGTGAATCT TGCCGCTTCA AAGAAATTTC CATTCGATCA CACCAAAGTG AATGGACGAG GCATAACCCT AAAGGGCGAG ATAAACAATC TTTTCGACAG GGATTACCAG TATGTTACAG GTTATCCAAT GCCGGGAATC AATTTTGTTG TGGGCATTCG AGCCGATTTC TAA
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Protein sequence | MNKKVFLAVM LGLLSSRGVF AEEASLTYMM DEVVVTSSRF EEMKSTVTSN VTIIGRAEIE LSSAKDLSEL LAEKSLGHFQ KYPGTLTSIG LRGFRSETHG NDLMGKVLIL LDGRRAGTGN LAKIMTENVE RIEIIRGPAS VQYGSAAIGG VVNVITKTGS GAPSFFAAQQ VGNNEYVKTG AGAEGSIGRF DFSGSVSTAD MGDYQTGSGD TYQNTGFDDQ VMGSLSLGYE FLPHQRMQVI YHVFDLERAG SPSYFATPDF DAYTVQNNHS TDLMYEGSDG EGRWSWMARY YMGMDKYGYV SPSSSYMSQS DTDQQGAQAQ ISYAEASMRV TAGVDWLQYE LESTLAPKWS QYENPAAFVL GRYLFFDDAL TLTAGLRYDD YSVDLHANEG TSRNTDNTSG QAGLAFRIAD GLRLRGSYAE GFRMPSAREL AGEIVSYGKT YIGNAELKPE SSLTWEGGID VAWKRLVASC TVFTTDYTDL IETSATGASS YTYVNVGSAT VSGLEAELSW PFAPLGENWT VEPFAGYTHL FEFKDDKTGA NLPYTPEWNA STGIRLRDKG GFAGSVNVAM TGSTIVQDWE NNNGAFVTKG SFAVVNLAAS KKFPFDHTKV NGRGITLKGE INNLFDRDYQ YVTGYPMPGI NFVVGIRADF
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