| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1027 |
|---|
| Symbol | |
|---|
| ID | 3745807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1167389 |
|---|
| End bp | 1170688 |
|---|
| Gene Length | 3300 bp |
|---|
| Protein Length | 1099 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637769062 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_374932 |
|---|
| Protein GI | 78186889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0040274 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCGT CCGCGTCATC GGCTCATGCC GTTTATTCAT CTTCGGCATC ATGGCACAGC
GAGGCGGAGT TCCTTGCCGG AGCCAGGGCC AACGGCGATG CTTGGGAGGC GAAAGGGCTG
GTCGGGCCTG AGATTAAGAC CATGCATTTG CGCCTAAGGT ATGCTTATAC CTATGATTTC
GTCTATAACG ACCGCGGATC CGGAGCTAAG GCAAATATCG CCATCTGGCG TCCCCGGGTT
CCTGACGGGT GGGTACGCCT TGGTGATTAC GCGCAGCCGG GAGCAAACTA TAATGAATCC
CAGCCAACCG GTAAGCCGCC TTGTCTTATC GTCATGTGGG ACGACCGGTT TCCCCAGGGT
GATTCGAAGA ACGCCCCGTA CCTTAAGCCG GCTACGGGCT TTACAAAGGC ATGGGATGAT
ACGAAGACCC ATGGCAAGAT GGACGGAAGT TTCTGGGTAC CCATAAGTGC GAAAGGGTAC
GCACCTGTCG GCTGTGTTGC GAACGGGAGT CACAGCGCCC CAGCCGACCT CAACTGTGTC
TACACGGTCA ATACCGACTT GCTTACATGG ACAGGGAACA GCTGGATCGG TCAGATATGG
ACCGACAGGA AATCTGGTGG AGTACATGAC TGTGCTCTTT GGGCCTGGAA GCAGGATTCC
CCGTCCGATA AAATCCTCCC CGGCATTCCG ACCAACTCAT TTTGGGCCGT CGGTTCCTAC
ACGAAGAGTT TGGGTAGAGC CCCTGGAATG ATCCTTGGCT TGAAGCCCGA TATCGCAAGG
TCTGAGGCAA GCAATGCGCT CATCGACACA TATAGGCGGA CATTAATCAG CGGTGTGAAG
AAGGTCTATC AGGATAGTGC CACCGTTAAG CTTAAGCTCC TTGAAGCCAG TGTGAAAGCG
AGGGCGAACG AAGCTGCCGG AGGAGGGGGC TCATTTGCGT CGATAGCGTC GGACTCCTTC
ATCAGTCCGG AGCTGAACGC CAAGATCAAA GCGCTGCCTG CAGTCGGTGC AAACGGGGGG
ACGACGGTAT CAAATGATAT GCCGACGGTC TCCTATGCAG CAACAATGTT CACTGGAAAG
GCGAACCAGA TTGCAGCTCT TGGCCGTTCT GTCGACCTGG GTCAGCTGCC TGGATTCGAC
AGCATCATGC AGCTCAAGGG GGTTACCGTA ACCAATGCCA GTTTCAGTCA GGGGAGTATC
ACTTCTGGCA AGGAAAAAGG ACAGCCTTGG ATGTGCCTCA GCGGAGACGT TACCATTTCG
ACCCAGAAGT TCGGATCGGT TTCAGGCAAA GTGGTCGCCT TGTCGCGGCT CTACCAAAAG
GAAGGCCTTC GCACCGGCTA TGTGATTAGT GTTCCCTCAG CAGATGTGAC GTCGAAGTTG
CCGGCATTCG GGGCTCCTCC TCTAAATGCA GTCAAGTTTT CCGACGCCGC AATTACCTTC
GGTCAGGAAG CCCATAGCTG GGAAGTAAGC GAATTGCCGA CTGAAGTGAA GGATTTGCTG
TCAGTCTATG TGCCTACGGG GAAAGAGGCG CTCAGGTTCC CCAAAGGAGA AAATGTCTGG
CTTGTTTCTT CTGTTGCAGG CAACAGCCTG TTCAGTGCTC CGTTTAGCGT CCTTGATGCA
GCCCCCCCGA AGGTGCTCTT TTCGGCGATC TTTCCAGACA AGCCTGCGGA TTCGTTCAAG
TTGCGGGCAA AGTTGCTTAG CAGTTACAAG GCGGCTTTTC TTCCTCATGG AATCAAGATT
GACACGCCTG ACCTGGAGAT TAGCTCAGGT CCTTTTAATG GGGTAACGCT ATGGTCAAAC
CTGCACATTG ACCTTTCGAA GCAGTTCCAA GTCGATCTTC CAGCGCGGAT TGATATTCCT
GTAGGAGCGA ATCCCCTTGC AGGAATAAGC GTATCGGGCC TTATTCCCGG GAGCTGGAAG
AATCCCATGG GGCTGAAAGG CCTTGAATTG GATTCCATGA GGGTTGGCGG CACGTTTGGC
GGCGTTTCGC CGAGTCTTGG CCTGGGAGGA ATCTTGGACC TTGGTCAAGG ATGGAAGTTC
GATCTAGCCG GTTCATTCTC ATTCGCTTCG CCTGTGGCTC TTTCAGGCAT GAGCTGCTCA
CTTGACCGCG ATCTTTCACT GGGTGACCTG GTTTCCCTTT ACGGGATCGT CTTGAAGGCG
GCTACCCCTT CTGCGCAGCT ACCTGCGCCG TCGACGGTCG ATCTGCCCCT TGCCAACCTC
AAGGTGATGA AGCCGAGCTT CGCAATTGCC GAATTTGACA TCCCTGCCAT GAACCTTCGT
CAGGGGTTGA CCTTTGATGG GGGCCTAAGC ATCGGAACTG CCCAGCTGGG ATCTGCTTCA
GTCTGGATGC TTGCCGGCAA GGGGCTGGAC TGCAAAGGGT GGATTTCTCC GTTTTCGTTT
GGTCCGTTCA AGGTCAGCGG GAATGGCAAG GACAAGCTCT ACAATACTCG TGATGATGCC
CCTTATCTTG ACCTGGAGTA TACCCCGAAA ACCGCGTACA GTGTCAGCCA ACACTGTTAC
CTAAGTGGCC GGACTATGGT GGCCGGAGCC CCCATGAACA TCCAGCTTAA CCTGGGCAAG
GATAATCTGG CAGTAGATAT CGATGGCAAG CTGGGAGGCC TTTTCGATGC CCATATCGGC
GCACAGGGAA CCCAAGCGGT ACTCTCCGAT ATCAGCAAGG GAGGAAGCCT CGCTTTTCAG
GCAGAAATGA GGAACTCAGG CATTGATGCT CTTGCAGGGA AAATCGACGG CCAGCTGGGA
TCCAGCTCTG TTGTAAAAAA AGCCATTGAT CTTGTCGGGG GGGGATTCGC TATTCGCTCT
GTCCAGTTCT CCGGAACACT TGACGGAATC AATGCTGGAG CAATTTCCGG CGGATCAGTC
AAGGCGAGTG CATTCGGCAG GCCTGCCGAT ATTTCGTTCA GTGCGACGAA TGTACCAGGG
CTTGAATCGC TGGTATCCGG TCTGATGGTC AAAAAGGTTG AAAGTATTGC GATGGCGGTG
CTGAAGGATC CGCTCGCATT CTTCGGGAAT GTCTGCACGA ATATGGGTGA TCTGGGGACC
GATGTCCTTT CCGGTGTTAC CAGTAAGTTG CAGAAAAGCC CGACGCAGTA CTTCACTGAT
GCCCAGACCG CAGCTACATC GGCTGGGGAT CAGGCGTATC AAGCTGCCAG TGCTGCGGCG
ACTGTAGCAA AAGAGACGGC TGACAAGGCA GCAAGGGCTG CCGAACAGGC GGCCAAAAAA
ATGGCTGAGA CCCTGAAGAA GATCGCGGAA GAGGCCTGGA AAGCTGTACG ATTCTGGTAA
|
|---|
| Protein sequence | MTPSASSAHA VYSSSASWHS EAEFLAGARA NGDAWEAKGL VGPEIKTMHL RLRYAYTYDF
VYNDRGSGAK ANIAIWRPRV PDGWVRLGDY AQPGANYNES QPTGKPPCLI VMWDDRFPQG
DSKNAPYLKP ATGFTKAWDD TKTHGKMDGS FWVPISAKGY APVGCVANGS HSAPADLNCV
YTVNTDLLTW TGNSWIGQIW TDRKSGGVHD CALWAWKQDS PSDKILPGIP TNSFWAVGSY
TKSLGRAPGM ILGLKPDIAR SEASNALIDT YRRTLISGVK KVYQDSATVK LKLLEASVKA
RANEAAGGGG SFASIASDSF ISPELNAKIK ALPAVGANGG TTVSNDMPTV SYAATMFTGK
ANQIAALGRS VDLGQLPGFD SIMQLKGVTV TNASFSQGSI TSGKEKGQPW MCLSGDVTIS
TQKFGSVSGK VVALSRLYQK EGLRTGYVIS VPSADVTSKL PAFGAPPLNA VKFSDAAITF
GQEAHSWEVS ELPTEVKDLL SVYVPTGKEA LRFPKGENVW LVSSVAGNSL FSAPFSVLDA
APPKVLFSAI FPDKPADSFK LRAKLLSSYK AAFLPHGIKI DTPDLEISSG PFNGVTLWSN
LHIDLSKQFQ VDLPARIDIP VGANPLAGIS VSGLIPGSWK NPMGLKGLEL DSMRVGGTFG
GVSPSLGLGG ILDLGQGWKF DLAGSFSFAS PVALSGMSCS LDRDLSLGDL VSLYGIVLKA
ATPSAQLPAP STVDLPLANL KVMKPSFAIA EFDIPAMNLR QGLTFDGGLS IGTAQLGSAS
VWMLAGKGLD CKGWISPFSF GPFKVSGNGK DKLYNTRDDA PYLDLEYTPK TAYSVSQHCY
LSGRTMVAGA PMNIQLNLGK DNLAVDIDGK LGGLFDAHIG AQGTQAVLSD ISKGGSLAFQ
AEMRNSGIDA LAGKIDGQLG SSSVVKKAID LVGGGFAIRS VQFSGTLDGI NAGAISGGSV
KASAFGRPAD ISFSATNVPG LESLVSGLMV KKVESIAMAV LKDPLAFFGN VCTNMGDLGT
DVLSGVTSKL QKSPTQYFTD AQTAATSAGD QAYQAASAAA TVAKETADKA ARAAEQAAKK
MAETLKKIAE EAWKAVRFW
|
|---|
| |