| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0521 |
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| Symbol | |
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| ID | 3744400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | + |
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| Start bp | 612645 |
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| End bp | 614933 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637768558 |
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| Product | 3'-5' exoribonuclease, VacB and RNase II |
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| Protein accession | YP_374448 |
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| Protein GI | 78186405 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00138071 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.147067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCAA ACGACCATAT TCTCATCAAC GAGTTTCTTT TCATGCGCGG CGAGAGTTCG
CTTGGCGCTG AAATAGTCAA CTTTCTTTCA GAGCACGAAG GGCAGCGTTA CCGCTCGGTG
GAGCTGGCCA AGGCCATGGG CTACGGCGAG TCCCGCCAGC TTCCCGGATT CTGGTACGTG
CTGCACAAGA TGCAGGATGA GGGGACGCTC GACAAGGATT CCAACCGCTG CTACGGCATG
CCGGGCCCCG ACGCTTCCTA CGAAGACCAT CTACAGCACC AGAAACCCTT CCCAATACCC
GACAAGGACC AGTACAAGGT CGACAGCACC TATACGGGTT TCATCACCAC CCATCCCAAC
GGGTATGGAT TCGTGAAGGT CGAGGGATTC GATGACGATG TCTTCATCAA GGCCGATGTC
ATGAACTCCG CAATCCACGG TGACGAGGTC GAGCTTACGG TCACCAAGGT CCCCAAGACA
TACAGTTCCC GTTCGACGCC TCATCAGCGC TGCGAGGGCA TGGTCACGAA AATCATCCAG
CGCAAGGTCT CGACCATCGT CGGCACGCTT GTGCGCGGCA ACCGCCGCTT CACCCTGAAG
GCGGATGAAC GGAAGATCCT GCCTGAAATC ATCATTTCGA TCAAAAACGC AGCCAAGGCC
AAGGACGGCC AGAAGGTCAT GGTCGGCGAG CTCGATTTCA GCAAGGAGGG AGCAATACAG
GGCAAAGTGC TGGAGATCCT CGGTACAGCC GGTGACTCCG CAGTTGAAGT GAGCGCCATC
GCCCGGAGCA AGGGCATTGA CGAAACCTTC GACAAGGAGA TCGTAAAGGC CGCCTCAGCG
ATGAAAATGG GCGTGACAGA CAAAGACCTG CAGGAACGCC TCGACGTCCG CGACAAGGTG
CTCTTTACCA TCGATCCCGT CGACGCAAAG GACTTCGACG ACGCCCTTTC GGTCGAACCT
CTCGAAAACG GGCTCTGGAA GATCGGTGTA CACATTGCCG ACGTATCGCA CTATGTGACC
GAGGACTCTC CGCTCGATAA AGAAGCCCTG AAACGCGCCA CTTCCGTCTA TCTCGTCGAC
CGCGTCATTC CGATGCTGCC TTCCCGTCTT TCCGAAGACA TCTGCAGCCT CAACCCCGGC
GTCGATCGCA TGGCATTCTC CGTTTTCTTC ACCATGACGG AGGATGGCAA GGTCCAGAAG
CATGAGTTCC ACAAGACCGT CATTCACAGC AAGCGGCGTT TCACCTACGA AGACGTCCAG
GAGATTCTCA ACAACAAGAA GGGTGACTAC CTGATGGAGC TGCAGCTGCT TGAGAAGATC
AGCGTGCTGC TTCGTGAAGA GCGTTTCCGC CACGGCGGCC TTGATTTCGA AACCGAAGAG
GTCCGCTTCA AGCTTGGCAA GAAGGGCGAG CCGCTCGAAG TCATGAAAAA GGAGCGCCTC
GGCAGCCATC GCCTGATTGA AGAGTTCATG CTGCTGGCCA ACCGCAAGGT GGCAGAGTTT
CTGACCAAGA CCTTCAAGGA AGGCAAGAAG GTGCCTCAGC CGGTGATCTA CCGCGTGCAC
GATTCGCCCC AGCAGGAGCG GGTCATCATT CTTGCCAATT TCGTCAAGAA GATCGGCTAC
GACCTCAAGA TCAACAAGGG CAAGGACGGC CCGATCGTCT CTGCCAAGTC GCTGCGTGAG
CTCCTGCAGA AGGTCCACGG CACCAACGTC GAGTTCCTCG TCAACGAGCT CGTCCTTCGC
TGCATGTCGA AAGCCGTCTA TACCGGGGAG AACGATGGCC ACTACGGCCT CGGTTTCGAG
CACTATACCC ACTTCACTTC GCCGATCAGG CGCTATCCCG ACCTCATCGT GCATCGACTG
CTCTTCGAGT ATGAGGCGTT CCGTAAAAAG CGCCGCAAGA TGCCCGAGGC GCGCATTGCC
GAGCTGAAGC AGAAAATCGA TACGGTATGC CGCATCTCAA ACGAGCGCGA AAAGGTTGCC
GTCGAGGCTG AGCGGGAATC CATCAAGCTC AAGCAGGTCG AGTACATGCA GAGCCACACC
GGAAAGGTCT ATCCTGGCGT CATTTCAGGA GCCACCGAGT ACGGCATCTA TGTCCGCATG
GTCGATTTCG CCATCGAGGG TCTGGTGCAC ATGCGCAACC TCACCGACGA CTACTACGAG
TTTGACGAGA AGTCATACTC GCTGGTTGGC AAGCGCCGCA AAAAGCGCCT CCAGATAGGC
CAGAAGGTAA TGGTGAAGGT GCACGAGGTC GACATGCAGC GCCGCACCAT CGACCTGACG
CTCGGCTAG
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| Protein sequence | MKPNDHILIN EFLFMRGESS LGAEIVNFLS EHEGQRYRSV ELAKAMGYGE SRQLPGFWYV
LHKMQDEGTL DKDSNRCYGM PGPDASYEDH LQHQKPFPIP DKDQYKVDST YTGFITTHPN
GYGFVKVEGF DDDVFIKADV MNSAIHGDEV ELTVTKVPKT YSSRSTPHQR CEGMVTKIIQ
RKVSTIVGTL VRGNRRFTLK ADERKILPEI IISIKNAAKA KDGQKVMVGE LDFSKEGAIQ
GKVLEILGTA GDSAVEVSAI ARSKGIDETF DKEIVKAASA MKMGVTDKDL QERLDVRDKV
LFTIDPVDAK DFDDALSVEP LENGLWKIGV HIADVSHYVT EDSPLDKEAL KRATSVYLVD
RVIPMLPSRL SEDICSLNPG VDRMAFSVFF TMTEDGKVQK HEFHKTVIHS KRRFTYEDVQ
EILNNKKGDY LMELQLLEKI SVLLREERFR HGGLDFETEE VRFKLGKKGE PLEVMKKERL
GSHRLIEEFM LLANRKVAEF LTKTFKEGKK VPQPVIYRVH DSPQQERVII LANFVKKIGY
DLKINKGKDG PIVSAKSLRE LLQKVHGTNV EFLVNELVLR CMSKAVYTGE NDGHYGLGFE
HYTHFTSPIR RYPDLIVHRL LFEYEAFRKK RRKMPEARIA ELKQKIDTVC RISNEREKVA
VEAERESIKL KQVEYMQSHT GKVYPGVISG ATEYGIYVRM VDFAIEGLVH MRNLTDDYYE
FDEKSYSLVG KRRKKRLQIG QKVMVKVHEV DMQRRTIDLT LG
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