| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0276 |
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| Symbol | |
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| ID | 3745259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | + |
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| Start bp | 281789 |
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| End bp | 282853 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637768314 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_374207 |
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| Protein GI | 78186164 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.211478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG GAAAGCTCGA CATCGACCGC CCCGTCATCC TCGCCCCCAT GGAGGATGTG
ACCGACCGCG CGTTCCGGCA GCTCTGCAAG CGCCACGGGG CGGACATCGT CTATACGGAG
TTTGTCAGTG CCGAGGCGCT CAGGCGGGGC ATTGAAAAGA CCGTCCGGAA ACTGAAGGCG
GATCCGGTTG AGCGGCCCCT GGCTGTGCAG ATTTTCGGCA GCACGGTGGA GTCGATGGTG
GAGGCTGCGG TGATTGCCGA AGAGTTCCAG CCGGATTACC TTGACATCAA TTTCGGATGC
CCGACGAAGA AGGTTGCCGG GAAGGGCGCC GGGGCTGCGC TGCTGAAAGA GCCGGAAAAG
ATGGCTGCCA TTGCCGAGGC CGTGGTGAAA GCCGTCCGGC TGCCGGTGAC GGCCAAGACC
CGGATCGGCT GGGACCACGA ATCGATCAAC ATTCTCGATG TGCTCCGGCG CCTCGAGGAC
GCCGGCATTC AGGCCCTCGC CCTGCACGGA CGGACCCGGA GCGACATGTA CAAAGGCAAA
GCTGACTGGG GGTGGATTGC GGAGGCCAAA CGGCATGCCC GCATTCCCCT TATCGCCAAC
GGTGACGTCT GGAGTCCCGA AGACGCACTG AGGATGTTCC TGGAAACCGG CGCCGACGGG
GTGATGATCG GGCGGGGCTC GATCGGCAAC CCGTTCATCT TTTCCGGGAC GAAGCATCTC
CTGAAAACCG GCACCCCGCC GCCTCCACCC GACTTCAGAC TGCGCATCAA GGCAGCCATC
GAGCACCTGC AGCTCTCGGT GGAGTTCAAG GGTGAGAAAT ACGGGACGCT TGAAATGCGA
CGTCATTATG CCACCTACCT GAAAGGCCTG CCGAAAGTAT CGGTGGTGCG CAACAAACTG
GTGCGCGAGG AGGATTGGCG GGCAGTGGAG AGTATCCTGC TCGAGTACCG CGAAGAGTGT
GAGGGCTATG CCCGGGAGGG GCGGATCCGC GAGCATGCGG AGTACCTCAA CGACCATTCA
GATAAACTTG TATTGAACTA TAAAGCATCG AACACAACCA TATGA
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| Protein sequence | MKIGKLDIDR PVILAPMEDV TDRAFRQLCK RHGADIVYTE FVSAEALRRG IEKTVRKLKA
DPVERPLAVQ IFGSTVESMV EAAVIAEEFQ PDYLDINFGC PTKKVAGKGA GAALLKEPEK
MAAIAEAVVK AVRLPVTAKT RIGWDHESIN ILDVLRRLED AGIQALALHG RTRSDMYKGK
ADWGWIAEAK RHARIPLIAN GDVWSPEDAL RMFLETGADG VMIGRGSIGN PFIFSGTKHL
LKTGTPPPPP DFRLRIKAAI EHLQLSVEFK GEKYGTLEMR RHYATYLKGL PKVSVVRNKL
VREEDWRAVE SILLEYREEC EGYAREGRIR EHAEYLNDHS DKLVLNYKAS NTTI
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