Gene Plut_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0238 
Symbol 
ID3746162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp235977 
End bp236981 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID637768276 
Productbacteriochlorophyll c synthase 
Protein accessionYP_374169 
Protein GI78186126 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.325704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTA CCCCAGGTAC CGGTTTCATC AACAAAATCA AGGCGCACCT TGAACTGCTC 
GACCCCGTCA CCTGGATCAG CGTTTTTCCC GGACTCGCCT GCGGTGCTAT GGCTTCCGGA
GCCATGCAGG CGACGCCGCA TGATTATCTG GTGCTGTTCG CCGTGTTTCT CATGTACGGG
CCGCTTGGCA CCGGGTTCAG CCAGTCGGTG AACGATTATT TCGATCTGGA GCTCGACAGG
GTCAACGAAC CCACCCGTCC CATTCCTTCA GGCCGCCTGA CAAAACAAGA GGCGCTTCTC
AACTGCATCA TCGTCGTCCT GCTCGCTATG GGGCTCGGCA TCTGGCTCGG CATTGACACC
GGCGGAATGC GCGGCATGGT CATCACAACC ATGATTTTTT CTGCGCTCTT CGTTGCCTAC
ATCTACTCTG CTCCGCCATT CAAGCTGAAA AAGAACATTT TTGCCTCCGC CCCCGGCGTC
GGCTTCTCCT ATGGGTTCGT CACGTTCCTT TCCGGCAATG CGCTTTTCAG CGATATCCGT
CCGGAGGTAG TGTGGCTTGC AGCCCTGAAC TTCTTCATGG CCATAGCGCT CATCATCATG
AACGACTTCA AGTCTGTCGA GGGTGATCGG GAAGGCGGCA TGAAATCCTT GACCGTCATG
ATCGGTGCGA AGAACACCTT CATTGTCGCA TTCGCCATCA TCGACATGGT ATTTGCCGTG
CTGGTCTGGC TTGCCTGGAG CTGGGGCTTC ATGGTGCCGA TGGCCCTTGT GGTTCTGGGC
CTCGTGCTCA ATATCGTGAT CCAGATCCAG CTGCTCGCCG ATCCGAAGGG CGGCGTGTCG
TTCCTCAAGG GGACGGTGGA GGACGGATTC GGCAATGCGA TCGGCAAGAG CGATGTGCAG
GAGCACAACA CCTTTCTGCG TTTTCAGGTG GCCAACAACG TCCTTTTTCT CGTCAACAAC
CTTGTGCTTG CCGCCATGAT CGGCATCAGG TACATGCCGT CCTAG
 
Protein sequence
MPSTPGTGFI NKIKAHLELL DPVTWISVFP GLACGAMASG AMQATPHDYL VLFAVFLMYG 
PLGTGFSQSV NDYFDLELDR VNEPTRPIPS GRLTKQEALL NCIIVVLLAM GLGIWLGIDT
GGMRGMVITT MIFSALFVAY IYSAPPFKLK KNIFASAPGV GFSYGFVTFL SGNALFSDIR
PEVVWLAALN FFMAIALIIM NDFKSVEGDR EGGMKSLTVM IGAKNTFIVA FAIIDMVFAV
LVWLAWSWGF MVPMALVVLG LVLNIVIQIQ LLADPKGGVS FLKGTVEDGF GNAIGKSDVQ
EHNTFLRFQV ANNVLFLVNN LVLAAMIGIR YMPS