| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0206 |
|---|
| Symbol | rpsD |
|---|
| ID | 3745669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 200982 |
|---|
| End bp | 201593 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637768244 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_374137 |
|---|
| Protein GI | 78186094 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000707941 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAT TCAGAGGTTC AATAACTAAA GTATCCCGCA GGCTTGGCGT CGCGCTTTCG
CCGAAAGCCG AGAAATACCT TGAAAGACGC CCGTTCGCTC CCGGCCAGCA TGGTCAGGGC
CGCAGGGGAA AAATCTCCGA ATATGCACTG CAGCTTCGTG AGAAGCAGAA GATGAAGTAT
CTCTACGGCA TCCTCGAAAA GCAGTTCAGG AACTACTATA AGAAGGCAGT ATCCCAGAGG
GGCGTCACTG GTGACAACCT CGTCAAACTG ATTGAGCGCC GTCTTGACAA TGTCGTCTTC
CGCGCAGGGT TTGCCCCTTC GCGTGCCGGT GCTCGCCAGC TGGTTTCGCA CAGCCATCTT
CTTGTCAACG GCAGGAAGGT AAACATTCCT TCTTTCCTTG TCTCTCCCGG CGACCTTATC
GAGTTCCGCC AGAAGAGCAG AAATATGGAT GCTGTGACCG ATGCCCTGAA CAGGGCTCCA
GATGCAAGGA TTCCTGCCTG GATCCAGGTC GACAAGGCGA ACCAGAAAGC CGTCTTCCTC
AGCGTCCCTG AGCGTGTTGA TATTCAGGAA CCCTATAACG AGCAGTTGGT CGTTGAGTTG
TATTCGAAGT GA
|
|---|
| Protein sequence | MARFRGSITK VSRRLGVALS PKAEKYLERR PFAPGQHGQG RRGKISEYAL QLREKQKMKY
LYGILEKQFR NYYKKAVSQR GVTGDNLVKL IERRLDNVVF RAGFAPSRAG ARQLVSHSHL
LVNGRKVNIP SFLVSPGDLI EFRQKSRNMD AVTDALNRAP DARIPAWIQV DKANQKAVFL
SVPERVDIQE PYNEQLVVEL YSK
|
|---|
| |