| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0201 |
|---|
| Symbol | secY |
|---|
| ID | 3744795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 197478 |
|---|
| End bp | 198809 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637768239 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_374132 |
|---|
| Protein GI | 78186089 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.124191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CTGAAAGCAT AAGGAACATC AACAAAATCC CTGAACTCCG TCAGAGGATC
CTTTATACGC TTCTCCTGCT GTTCATCTAC AGGCTTGGTT CCCATATCAC CATACCGGGT
GTCGATGCGT CCGCCGTAGC GGGCGCATCG TCGTCCCATG CCAACGACCT TTTCGGCCTG
TTCGATCTGT TCGTCGGCGG AGCTTTTGCC AGAGCATCGA TTTTCTCGCT CGGCATCATG
CCCTACATTT CCGCATCGAT CATCATTCAG CTGCTCGGCG CAGTCACCCC TTATTTTCAG
AAGCTCCAGC AGGAGGGCGA AGAGGGCCGC CAGAAGATCA ACCAGATGAC CCGGCTTGGA
ACCATCTTCA TCGCTGCACT CCAGGCATGG GGCGTGAGCG TCAGTCTATC GAGCCCATCC
TCGTTCGGCC ATTCCGTAGT GCCTGATCCC GGATTTTTCT TTTCCCTCAG TGCCGTCATC
ATCCTGACCG CCTCCACTGT TTTCGTGATG TGGCTCGGCG AGCGCATTAC CGAACAGGGC
ATCGGCAACG GCATCTCGCT CATCATCATG ATCGGCATTC TGGCCGGGTT CCCTGCATCC
CTCGTCAACG AGTACCGTTC ACTCTCGCTC GGCAGCAAGA ACTGGATCAT CGAGATCATC
ATTCTCGCCA TGATGGTGGC CATCGTAGCA TTTGTCGTCC TTCTGACAGT CGGCACCCGC
CGCGTCCCCG TCCAACATGC CAAGAGGGTG GTTGGCCGTA AAGTATATGG TGGAGGCACC
CAGTACATCC CGATGCGCAT CAATACCGCC GGCGTCATGC CGATCATTTT TGCACAGTCC
ATCATGTTCC TGCCAAGCAC TTTCCTTTCG TTCTTCCCTG ACAGTGAGGC CATGCAGTCG
GTCGCTTCAA TATTTGCCTA TGACTCATGG TGGTATGCAC TCATGTTCGG CACCATGATC
GTTTTCTTTA CCTATTTCTA TACGGCCATC GCCTTCAACC CGAAGGAGGT CGCAGATACC
ATGCGCCGCC AGGGCGGCTT TATTCCGGGT GTCCGGCCCG GCAAGAGCAC GGCGGACTTC
ATCGACAATA TCCTGACACG CATCACCCTT CCCGGCGCTG TCTCGCTTGC ACTCATCGCG
GTGCTGCCGA CGTTCCTTAC GAAGTTTGCC AATGTTACCC CCGGATTTGC TCAGTTCTTC
GGCGGAACAA GCCTGCTCAT CATCGTCGGT GTCGGTCTGG ATACCCTGCA GCAGGTAGAA
AGCCATCTGC TCATGCGCCA CTATGACGGA TTCATGAAAG CCGGCAAGAC CCGCGGCCGC
CAGGCACGCT AA
|
|---|
| Protein sequence | MKLTESIRNI NKIPELRQRI LYTLLLLFIY RLGSHITIPG VDASAVAGAS SSHANDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIIQ LLGAVTPYFQ KLQQEGEEGR QKINQMTRLG
TIFIAALQAW GVSVSLSSPS SFGHSVVPDP GFFFSLSAVI ILTASTVFVM WLGERITEQG
IGNGISLIIM IGILAGFPAS LVNEYRSLSL GSKNWIIEII ILAMMVAIVA FVVLLTVGTR
RVPVQHAKRV VGRKVYGGGT QYIPMRINTA GVMPIIFAQS IMFLPSTFLS FFPDSEAMQS
VASIFAYDSW WYALMFGTMI VFFTYFYTAI AFNPKEVADT MRRQGGFIPG VRPGKSTADF
IDNILTRITL PGAVSLALIA VLPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQVE
SHLLMRHYDG FMKAGKTRGR QAR
|
|---|
| |