Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0198 |
Symbol | rpsE |
ID | 3744792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 196152 |
End bp | 196667 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637768236 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_374129 |
Protein GI | 78186086 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.136971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA CAGCTAAAGG TATCAGGCCG GGCGAATTGA ATCTGAAGGA GAAACTTGTC CACATCAACA GGACCGCAAA GGTCGTGAAG GGTGGAAAGC GGTTCGGCTT CAATGCGATT GTCGTTGTCG GCGATAAAGA AGGTCATGTC GGTTACGGCC TCGGCAAAGC TAACGAAGTA CAGGACGCGA TTGCAAAGGG CGTCGAAGAC GGCAAGAAAA ATGTCGTGAA GGTGCCGATC ATCAAGGGAA CCATTCCCCA CCAGATCGTC GCAAAATACG GTTCGGCAAA AGTGCTTATG AAGCCGGCGA CTCCGGGTAC AGGGCTGATC GCAGGCGGCG CCGTCAGGGC AGTGCTGGAA ATGGCCGGTG TCCGTGATGT GCTCACCAAG TCACTCGGAT CCTCCAATCC CCACAACGTG GTGAAAGCAG CGATCCTTGG ACTCAAGAGC ATCTCTGATG CCAATGATGT TGCCGAGAGA CGGTCCAAGA GCCTCAAAGA GGTATTTGAA AGCTAA
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Protein sequence | MAKTAKGIRP GELNLKEKLV HINRTAKVVK GGKRFGFNAI VVVGDKEGHV GYGLGKANEV QDAIAKGVED GKKNVVKVPI IKGTIPHQIV AKYGSAKVLM KPATPGTGLI AGGAVRAVLE MAGVRDVLTK SLGSSNPHNV VKAAILGLKS ISDANDVAER RSKSLKEVFE S
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