Gene Plut_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0054 
Symbol 
ID3745818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp56993 
End bp58612 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content61% 
IMG OID637768081 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_373987 
Protein GI78185944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein
[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCG CAGCAGCACA CCCGTCCAGC ATGCCCTCCG TCGCGAACGG CTCAGAGGCG 
CATGCCTATG AAACCGGCGT ACGCCGTACC ATCATCACCT TGACGGTGAT TGTGGCGGCC
ATGCTGGAAT TGATCGACAC CACCATCGTC AATGTGGCAA TCAACCATAT CAGCGGCAAC
CTCGGCGCAA GCATCGAGGA TGTCTCATGG GTGGTGACGA GCTACGCCAT CGCCAACGTG
ATCGTCATCC CGCTCTCGGG GTTCCTTGGC AATCTGCTCG GCCGGAGAGC CTATTTCATC
GGATCCATCC TGCTCTTCAC TCTGGCTTCG CTGCTCTGCG GCCTCGCCGA CAACATCTGG
ACGCTGGTCT TTTTCCGCTT CCTGCAGGGC ATCGGCGGCG GTGCCCTCCT GCCGACCTCC
CAGGCGATCC TCTATGAAAC CTTCCGACCA GAGGAACGGG GCGCGGCGAC CGGCATCTTC
TCCATGGGCC TCGTACTCGG CCCCACCATC GGCCCGCTGC TCGGAGGCTA CCTCGTGGAC
TACTTCAGCT GGGAATGGTG CTTTTTCGTC AACATCCCGG TAGGCCTTCT TGCCGCATGG
TCGGCATTCA CATTCATCCG GGAACCGAAG GTCCGCCACA AGGTACAGAA GATCGACTGG
ACCGGCATCG GGCTGCTCGC CGCCGGCATC GGTTCGCTGC AGTTCATTCT TGAACGCGGC
CAGTCGAAGG ACTGGTTCGA TACCCCATAC ATCACCTGGT TCACCCTCAT CGCCCTCACC
TCGCTCGTGG CATTCGTCTG GTGGGAGCTG CATACTGAGC ACCCGGCAGT CGACCTCAGT
GTGCTATCAC GCAGCAAGAA CCTCGCAATC GCCGCCGTAC TCACCTTCAT TGTAGGCTAC
GGCCTCTACG GCTCGCTGTT CGTCTTTCCG GTGTTCGTGC AGCGCCTGCT CGGGTTCACC
GCGGTGCTGA CAGGGCTCGT GCTGTTCCCA AGCGCCATGC TGACAGGCGC CATATCGCTC
CCGCTCGGCA TTGCCCTGCA GAAAGGCGCA TCTGCGAAAC TGATGATGGC TTTCGGCATG
GCGGCCTTCA TGGTGTTCTC CTGGGAACTT GGACAACAGA CCCTGCAATC GGGAGCGGAG
AACTTTTTCG CTGTGCTGTT GCTGCGCGGC CTGGCGCTCG GATTCATCTT CATTCCAGTC
ACCATGCTCG CCGTCACCGG CCTGCACGGG CGCGACATCG GACAGGCGAC CGGACTGAAC
AACATGGTCC GCCAGCTCGG AGGGTCATTC GGCATCGCCA TTACCAACAC CTATGTGGCA
CAGCGGGTCG CCGCACACCG GGTGGAACTC GCAGGCCACA TGTCAGCGTA TGATTCCGCT
GCGCTTGAAC GCCTGGAGGC CATTAAACAG GCAGCCGGAG CACGGGCAGC TCTCTCCCCT
GCCGATGCCG AGAACCTTGC CAACCGTGCG CTTGAGGGCA CCGTGATGGC CCAGAGCTAC
CACCTTGCCT ACATGGATGC CTTCATGCTG ATAGCCGTTT TGTTCCTCTG CAGTCTACCC
CTCCTGCTCT TCATCAGGGA GAAAAAGGGT GACCAGGGAC ATGCCCCGGA AGCTCACTGA
 
Protein sequence
MKSAAAHPSS MPSVANGSEA HAYETGVRRT IITLTVIVAA MLELIDTTIV NVAINHISGN 
LGASIEDVSW VVTSYAIANV IVIPLSGFLG NLLGRRAYFI GSILLFTLAS LLCGLADNIW
TLVFFRFLQG IGGGALLPTS QAILYETFRP EERGAATGIF SMGLVLGPTI GPLLGGYLVD
YFSWEWCFFV NIPVGLLAAW SAFTFIREPK VRHKVQKIDW TGIGLLAAGI GSLQFILERG
QSKDWFDTPY ITWFTLIALT SLVAFVWWEL HTEHPAVDLS VLSRSKNLAI AAVLTFIVGY
GLYGSLFVFP VFVQRLLGFT AVLTGLVLFP SAMLTGAISL PLGIALQKGA SAKLMMAFGM
AAFMVFSWEL GQQTLQSGAE NFFAVLLLRG LALGFIFIPV TMLAVTGLHG RDIGQATGLN
NMVRQLGGSF GIAITNTYVA QRVAAHRVEL AGHMSAYDSA ALERLEAIKQ AAGARAALSP
ADAENLANRA LEGTVMAQSY HLAYMDAFML IAVLFLCSLP LLLFIREKKG DQGHAPEAH