| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0013 |
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| Symbol | dapD |
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| ID | 3745719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | + |
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| Start bp | 17924 |
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| End bp | 18787 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637768041 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_373948 |
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| Protein GI | 78185905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.028271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.297509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCAT ACGACGCATT GAGAGAGGAG ATTCTGGGAT TTTCAGCACT GGGGGCCCAA
GCTCTGCAGG AGATGGCTGC TGCACGGGAA GCGTTCCTGC GCTTCAAGGC GCTCCTCAAC
GACGGTTCGA TCCGGGCCGC TGAAAAGGGC GCTTCAGGCT GGACGGTCAA CACATGGGTG
AAGCAGGGCA TCCTGCTCGG CATGAAACTT GGCCGCCTTG AGGCGGGCCG GGTCGAGACC
GGTGTTCCCG GCTCTTCATT TTCGTTCATC GACAAGGATA CATGGCCGCT GAAGTCCTTC
ACGCTGGAGA GCGGCGTGCG CATTGTGCCC GGCGGATCGT CCGTACGCGA CGGCTCCTAC
CTCGCCCCTT CCGTGGTGAT GATGCCTCCC GCCTATGTGA ACGTCGGCGC CTATGTCGAC
GAGGGCACCA TGATTGACTC CCACGCGCTC GTCGGAAGCT GCGCTCAGGT GGGGCGGCGC
GTCCATCTTT CCGCCGGGGT TCAGGTCGGT GGCGTACTTG AGCCCATCGG CGCAGTGCCG
GTCATCATCG AGGACGATGT TATGGTCGGC GGCAACTGCG GTATCTACGA AGGGACCATC
GTCAAGGAAC GGGCAGTAAT CGGCACAGGC GTCATCATCA ACGGTTCCAC GCCGGTCTAT
GATCTCGCCC GGGGCACCGT CCACCGAAAA ACGGCGGATT CGCCGCTGGT CATCCCGGAA
GGAGCTGTGG TCGTTGCCGG CTCAAGAGGC CTCAAGGGTG ACTTCGCCGA AGAGCACGGC
CTGTCAATCT ACACGCCTGT GATCATCAAG TACCGCGACA CGAAGACCGA TGCGGCAACT
GCACTCGAAG ACGCCCTCCG CTGA
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| Protein sequence | MGAYDALREE ILGFSALGAQ ALQEMAAARE AFLRFKALLN DGSIRAAEKG ASGWTVNTWV
KQGILLGMKL GRLEAGRVET GVPGSSFSFI DKDTWPLKSF TLESGVRIVP GGSSVRDGSY
LAPSVVMMPP AYVNVGAYVD EGTMIDSHAL VGSCAQVGRR VHLSAGVQVG GVLEPIGAVP
VIIEDDVMVG GNCGIYEGTI VKERAVIGTG VIINGSTPVY DLARGTVHRK TADSPLVIPE
GAVVVAGSRG LKGDFAEEHG LSIYTPVIIK YRDTKTDAAT ALEDALR
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