Gene Plut_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0012 
Symbol 
ID3745718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp16195 
End bp17907 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content58% 
IMG OID637768040 
Productribonuclease E and G 
Protein accessionYP_373947 
Protein GI78185904 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.76513e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA GTGTTAAAAA ACAGTTGCTG ATGAACAAGA CCGGCGACGA GATACAGGTT 
GCGCTGGTTG AGGACGGCAG GCTTGCTGAG CTGATCATCG AACGGCCTGA AAGCCGCCGC
AGCATCGGTG ATATCTATCT CGGCAGGGTT CACAAGGTCA TCGAAGGCCT CAAGGCCGCC
TTTGTGGACA TCGGGCAGAA GTCGGACGGC TTCCTGCATT TTTCCGATGT CGGCACTACA
ACCGAGGATT ACCGGGCTCT CATCGAGGAC GATGATGACG ACGACGAGAC CGCAGCAGAC
GAGACCGGTA CGGCAGAAGA CGGCGCCGAT GAAGAAGAGG CCCCCGTTGC CGCCGGGGCT
CCCCAGGAGC AGCAGGGTTC GCGGCAGTCT TCACGGAGCG GCGGGCGCAA GCCCCAGCCC
CAGCAGCGCA AAGAGGACGG TGCGGAAAAA CGACAGTCCT ACACCCAGCT GATTGCCGGC
AAGCTCAAGG CCAACGACTC GATTCTTGTC CAGGTCATCA AGGAGCCCAT CAGCACGAAG
GGGTCGCGCC TGACTTCAGA TATCACCATC GCCGGCCGGT TCATGGTGCT CCTGCCCTTC
GGAGGGGGGC AGGTGGCTGT CTCACGCCGG GTCGTTTCCC GCAAGGAGCG GGCCAGGCTG
AAAAAGCTTG TCCGCTCTAT GCTGCCTGAA GGGTTCGGTG CGATCATCCG CACGGTTGCC
GAGATGCAGG AGGAGACGCT GCTCAAGCAG GATCTCGAAA AGCTACTGGC CAAGTGGACG
CAGATCGAGG AAAAACTCAA GGATGCCGCA CCTCCGCAGC TCATTTTCAA GGAGGACACC
ATCATTTCGA GCGTGCTTCG CGACTCGCTG ACCTCCGATG TGACTGAAAT CGTCGCCAAC
TCTCCCTCCA TCCACAAGGA GACCCTCAAC TACATTGAGT GGGCCGCTCC CGAAATGGTG
AAGAACGTGT CGCTCTATCA GGGCAAGCTG CCCCTATTCG AGGGTTACGG CATCGCCAAG
GACGTTGAGT CAATTTTCTC GCGCAAGGTC TGGCTGAAAT CCGGCGGCTA CATCATCATC
GAGCATACTG AAGCTATGGT AGTGGTCGAC GTCAACAGCG GACGCTACGC TGCCAAACGG
GAGCAGGAGG AGAACTCGCT GCGCACCAAC ATGGAGGCCG CCCGTGAGGT GGTCCGCCAG
CTCCGCCTCC GCGACATCGG AGGCATCATC GTGGTCGACT TCATCGACAT GATGGACGCG
CGGAACTCAA AGAAGGTATA CGATTCGATG AAGGGTGAGC TGCGCAATGA CCGTGCAAAG
TCGAACATCC TCCCGATGTC GGATTTCGGC ATCATGCAGA TCACCCGCGA ACGCATCCGC
CCGAGCCTCA TGCAGCGAAT GGGAGACCAG TGCCCCGCAT GCGGTGGATC GGGTGTCGTG
CAGGCCCGCT TCACCACGAT CAACCAGATT GAACGCTGGC TGCGCAAGTA CGCGCTGCAG
CATGCCATGA AGTTCCAGCA GCTCGACCTC TACGTGAGTC CCACTGTGGC TGAACCACTG
AAAAACAGCG ACATGAACAC TGAACTGAAG TGGTTTCTCC AGCATATGCT TTTCGTCCGG
GTCAAACAGG ACGAAAGCCT GCGGAGCGAC GACTTCCGAT TCTACACCAG AAAAGACAGC
AGAGACATAA CCGCCGAATA CGGCGACCTT TAA
 
Protein sequence
MKKSVKKQLL MNKTGDEIQV ALVEDGRLAE LIIERPESRR SIGDIYLGRV HKVIEGLKAA 
FVDIGQKSDG FLHFSDVGTT TEDYRALIED DDDDDETAAD ETGTAEDGAD EEEAPVAAGA
PQEQQGSRQS SRSGGRKPQP QQRKEDGAEK RQSYTQLIAG KLKANDSILV QVIKEPISTK
GSRLTSDITI AGRFMVLLPF GGGQVAVSRR VVSRKERARL KKLVRSMLPE GFGAIIRTVA
EMQEETLLKQ DLEKLLAKWT QIEEKLKDAA PPQLIFKEDT IISSVLRDSL TSDVTEIVAN
SPSIHKETLN YIEWAAPEMV KNVSLYQGKL PLFEGYGIAK DVESIFSRKV WLKSGGYIII
EHTEAMVVVD VNSGRYAAKR EQEENSLRTN MEAAREVVRQ LRLRDIGGII VVDFIDMMDA
RNSKKVYDSM KGELRNDRAK SNILPMSDFG IMQITRERIR PSLMQRMGDQ CPACGGSGVV
QARFTTINQI ERWLRKYALQ HAMKFQQLDL YVSPTVAEPL KNSDMNTELK WFLQHMLFVR
VKQDESLRSD DFRFYTRKDS RDITAEYGDL