| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2803 |
|---|
| Symbol | |
|---|
| ID | 3754570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 3173392 |
|---|
| End bp | 3174555 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637767651 |
|---|
| Product | outer membrane protein (porin) |
|---|
| Protein accession | YP_373558 |
|---|
| Protein GI | 78063650 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0760601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CCATCGTGGC CGCGGCCGCA CTCGGGATGT TCGGCACCGC CGCGCACGCG
CAAAGCAGCG TCACGCTCTA CGGGTTGATC GATGCGGGTA TCACGTATTC GAACAAGGTC
GCGACGACGG GCGGGCACGA CAAGCTCGTC AAGTACGGTG ACGGCGTCGC GTCGGGCAGC
CGCTGGGGCA TCCGCGGCAC CGAGGATCTC GGCGGCGGGC TGAAGGCGCT GTTCGTGCTG
GAGAACGGCT TCAGCAGCGG CGACGGCTCG ATCGGCCAGG GTGGCGCGAT CTTCGGCCGC
CAGGCGTTCG TCGGCCTGTC GAAGAACGGG ATCGGCTCGC TGACGTTCGG CCGCCAGTAC
TCGTTCTCGA CCGACTACAT CGGCGCGAAC TATTCGATGG GCAGCCAGAC GCCGGCCGGC
AACTACGCGT ATCACATCAA CGACCTCGAC CAGCTGACGT CGAGCCGCAT CAACAACGCG
GTGAAGTTCC AGAGCGCGAA CTTCGCGGGC CTCACGTTCG GCGCGATGTA CGGCTTCTCG
AACTCGACGC AGTTCGCGGG CACGCCGACC ACGACCGGCG CGAACGGTTC GCAGGGTTCG
TCGAGCGCGT ACAGCTTCGG CGCGAACTAT GCACAAGGGC CGTTCGGCAT CGGCGCCGCG
TACACGAACA TCCGCTTCCC GAACGGCGCA CAGCCCGCAT TCGGCGTGAG CATCGCGAAC
GTCAACACGC AAGGGCTGCG CGACCTCGAG ACGGTCGGCG TCGGCGCGCG CTATGCGATC
GCCGCGGCGC TCGTGTGGGC GAACTGGACG CACACGAAGT TCGTGCCGCT GTCGGGCGAA
ACGTCGAAGC TGAACAACTA CGAAATCGGC GGCCGCTATG CGTTCACGCC GGCCCTGAGC
GGCGGTCTCG GCTATACGTT CTCGAAGCTC GACGGCCGCT ACGACGGCAA GTGGCACCAG
GTCAACGCCG CGGTCGACTA TGCGCTGTCG AAGCGTACGG ACGTGTACGT GAGCGCGGCC
TACCAGAAGG CGTCGGGCAG CAACACGATC AACGGTCGCG TGGTGCCGGT GCAGGCCGAG
ATCGGCTCGT CGGGATCGTT CATCGGCAAC GCGGGCGCGA ACACGCAGTT CGTCACGCGG
ATCGGCCTGC GTCACAAGTT CTGA
|
|---|
| Protein sequence | MKKTIVAAAA LGMFGTAAHA QSSVTLYGLI DAGITYSNKV ATTGGHDKLV KYGDGVASGS
RWGIRGTEDL GGGLKALFVL ENGFSSGDGS IGQGGAIFGR QAFVGLSKNG IGSLTFGRQY
SFSTDYIGAN YSMGSQTPAG NYAYHINDLD QLTSSRINNA VKFQSANFAG LTFGAMYGFS
NSTQFAGTPT TTGANGSQGS SSAYSFGANY AQGPFGIGAA YTNIRFPNGA QPAFGVSIAN
VNTQGLRDLE TVGVGARYAI AAALVWANWT HTKFVPLSGE TSKLNNYEIG GRYAFTPALS
GGLGYTFSKL DGRYDGKWHQ VNAAVDYALS KRTDVYVSAA YQKASGSNTI NGRVVPVQAE
IGSSGSFIGN AGANTQFVTR IGLRHKF
|
|---|
| |