Gene Bcep18194_B2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B2798 
Symbol 
ID3754565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp3168018 
End bp3168962 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID637767646 
ProductABC proline/glycine betaine transporter, periplasmic ligand binding protein 
Protein accessionYP_373553 
Protein GI78063645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA AGGCATGGAT GCTGGCCGCA ACACTGCTGG CAGCGCTGGC GACGGCCCCC 
GCTCACGCGT CGGAAGGCGA CGTCTGCAAA AAGGTGACGC TCGGCGATGT CGGCTGGAGC
GACATCGCGG CCACCACCGG CGTCGCGATG ATGCTGCTCG ACGGGCTCGG CTACGAGGCG
ACCAAGACGA TCGCGTCGCC GCCGATCGTG CTGGCCGGCG TGAAGAAGGC GCAGATCGAC
GCGTTCCTCG GCTACTGGGA TCCGAGCATG ACGCCGACGG TGAAGCCGTT CGTCGATGCC
GGCGCCGTCC ACCAGCTGCC GCAGCCGAAC CTGATCGGCG CGCGCTACAC GCTGGCCGTA
CCGCAATACG CGTCGGACAA GGGCCTCAAG AGTTTTGCCG ACATCGCGAA GTTCCGCGAC
CAGCTCGACG GCAAGATCTA CGGGATCGGC GCCGGCAACA ACGGCAATGC GCTGATCCAG
CGGATGATCG ACAAGAACGA GTTCGGGCTC GGCGGCTTCA AGCTGGTCGA ATCGAGCGAG
GCCGGGATGC TCGTGCAAGT GACCCGCGCG GTGCAGGAGC ACCGGATGAT CGTGTTCCTC
GCGTGGGAGC CGCACCCGAT GAACATCAAC TACAAGATCG CCTATCTCGA CGGCGGCGAT
ACCGTGTTCG GCCCGAACTA CGGCTCGGCG AAGGTCTACA CGCTCGTCAC GCCCGGCTAC
CTCGACCGCT GCCCGAACGT CGGCCGGCTG CTGACCAACC TGAAGTTCAC GACCGATGAA
GAGAACCAGT TGATGGTGCC GATCATGAAT CACGCCGATC CGGTCGCCGT CGCGAAGGAA
TGGGCGAAGA AGAACCCCGG CGTGCTGTCG AAGTGGCTCG ACGGCGTCAC GACCATCGAC
GGCAAGAACG CGAAGGACGC GATCGAGAAG CTCATCGGCG CCTGA
 
Protein sequence
MMKKAWMLAA TLLAALATAP AHASEGDVCK KVTLGDVGWS DIAATTGVAM MLLDGLGYEA 
TKTIASPPIV LAGVKKAQID AFLGYWDPSM TPTVKPFVDA GAVHQLPQPN LIGARYTLAV
PQYASDKGLK SFADIAKFRD QLDGKIYGIG AGNNGNALIQ RMIDKNEFGL GGFKLVESSE
AGMLVQVTRA VQEHRMIVFL AWEPHPMNIN YKIAYLDGGD TVFGPNYGSA KVYTLVTPGY
LDRCPNVGRL LTNLKFTTDE ENQLMVPIMN HADPVAVAKE WAKKNPGVLS KWLDGVTTID
GKNAKDAIEK LIGA