Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B2704 |
Symbol | |
ID | 3754471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 3061855 |
End bp | 3063957 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637767552 |
Product | TonB-dependent receptor |
Protein accession | YP_373459 |
Protein GI | 78063551 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTACCT CGACCCGTAT TGCCGCCGCG CTGTCCGGCG CGATCTCCGT TCTCTTCGCG TCGGCCGCAT GCGCACAAGG CGCCGACGCA CCGGCCGCGT CGACGCTGCC TGCAATCAAC GTCAACGCAA CCCGCGTGCC GGACTCGCTC ACATCGAAAT CGACCGGTAG CCTGAAACGC ACGCTCGAAC AGACGGTCGG CTCCGTGGGC TTCGTCGATG CCGACAGCTA CCGGAACACC TACGCCTTCA CGCTGCGCGA CGTGCTGAAG GACGTGCCCG GCGTGTTCGT CGAGAACCGC TACGGCCAGG AGCTGCGGCT GTCGATCCGC GGCTCGGGGA TTGCCCGCTC GTACCACACG CGCGGCCTCG AGATCCTGCA GGACGGCATC CCGACCAACC TCGCGGACGG CAGCGGCGAC TACTACCAGA TCGATCCGCT CGCGCTGCAG GCGGTGCAGG TCTACAAGGG CGGCAACGGC CTCGCGTACG GGGCGTCGAC ACTCGGCGGC GCGATCGACT TCATCACGCC GACCGCCCAT ACCGCCGACG CGCCGAACAT CCTGCGCGTG GAAGGCGGCA GCTACGGCAC GGTGCGCACG AGTGCGCAGA TCTCGCGCGT GCTCGGCCCG CTCGACTTCC TCGCGAACTT CAGCGTCAAT CACGCGGACG GCTATCGCGA TCATTCGAAG GGGCAATACG AGCAGTTCAA CGCGAACGTC GGCTACCGGT TCAGCCCGAC GGTCGAGACG CGCTTCTACG TCGGCGTGTA CGTCGTCGAC CAGTTGCTGC CGGGCACGCT GTCGCTGTCC GACGCGCTGA ACAATCCGAC CAAGGCCGCA CCGAACGCGA TGTCGGGCGA TCAGGCGCGC AACACGCGCA CCGAGCGGAT CGCGAACCGC ACGACCGTGA AGCTCGATTC GGGCGAACTG CAGTTCGACA CGTGGGCGAT CCACAAGAGC CTCTATCACC CGATCTTCCA GGCGCTCGAC CAGGACGGCT GGACCTACGG CTTCGCGCCG CGCTACACGG GCCACCTGAC GCTCGGCGGG ATGCGCAACG ACCTGATCGT CGGTGCGCGC TTCTTCGGCG GCCGCACGCA GGCGAACCAG TACGTGAACG TCAACGGCAA CAAGGGCGCG CAAACGCTCG ACTCGACGCA GACGGCGTTC AACTACGAGG CGTATGTCGA GAACCGGCTG TTCTTCGTAC CGACCGTCGC GCTGATGACG GGCGTGAAGG TGCTGCATTC GGTGCGCGAG TACATCGACA ACGGCGGGCT GCCGCGCAGC CCGAACTACA AGTCGACGAA CGCGAGCTAC AGCGGCGTCA ATCCGAAGCT CGGGCTGCTG TGGCAGCCGG ACGCGAACAC CCAGGCCTAC GTCGACATCA CACGCAGCCA GGACGTGCCC GACTTCACCG ACCTCACGCA AACCTTCTCG AACACGACAC GCTTCACGCC GCTCGCGGCG CAGCACGCGT GGACGATCGA GTTCGGCACG CGCGGCTCGC GCGAGCGCGT GAGCTGGGAC GTGACCGCTT ATCGCTCGCT CGTGCGCGAC CAGTTGCTGC AGTACACGAC GAACCCGGAT GTGCCGGCGT CGACATTCAA CGCGAACAAG ACGGTGTTGC AGGGGATCGA GGCCGGCGCA TCGGTCGAGT TGCTGCGCAA CGTCACCGGG CGCGGCGCGG GCGACAAGGT CACGCTGTCG GGCATCTGGA ACCTGAACGA CTTCCGCTTC AAGAACGATC CGCAGTACGG CAACAACCGG ATCGCGGGCG TGCCGCTGAA CGTGCTGCGC GCGACGCTGG GGTACGCGCG GCCGAGCGGC TTCCACATCG CGGCGACGCT CGACTGGGTG CCGTCGGGCG CGTGGGCCGA CGATGCGAAC ACGCTGCGCG TGCCGAGCTA CACGCTGCTC GGGCTGCAGG CCGGCTACGA CTTCCGCAAC GGGCTGTCGC TATTCGTCGA CGCGCGCAAC CTGACCAACA AGCGCTATGT GAGCGACATC AGCACGGTCG CGGATGCGCG CACCGCGAAC ACCGCGATCT TCTATCCGGG TGAAGGACGC AGCGTGTTCG CCGGCATGCG GTACGCGTTC TGA
|
Protein sequence | MFTSTRIAAA LSGAISVLFA SAACAQGADA PAASTLPAIN VNATRVPDSL TSKSTGSLKR TLEQTVGSVG FVDADSYRNT YAFTLRDVLK DVPGVFVENR YGQELRLSIR GSGIARSYHT RGLEILQDGI PTNLADGSGD YYQIDPLALQ AVQVYKGGNG LAYGASTLGG AIDFITPTAH TADAPNILRV EGGSYGTVRT SAQISRVLGP LDFLANFSVN HADGYRDHSK GQYEQFNANV GYRFSPTVET RFYVGVYVVD QLLPGTLSLS DALNNPTKAA PNAMSGDQAR NTRTERIANR TTVKLDSGEL QFDTWAIHKS LYHPIFQALD QDGWTYGFAP RYTGHLTLGG MRNDLIVGAR FFGGRTQANQ YVNVNGNKGA QTLDSTQTAF NYEAYVENRL FFVPTVALMT GVKVLHSVRE YIDNGGLPRS PNYKSTNASY SGVNPKLGLL WQPDANTQAY VDITRSQDVP DFTDLTQTFS NTTRFTPLAA QHAWTIEFGT RGSRERVSWD VTAYRSLVRD QLLQYTTNPD VPASTFNANK TVLQGIEAGA SVELLRNVTG RGAGDKVTLS GIWNLNDFRF KNDPQYGNNR IAGVPLNVLR ATLGYARPSG FHIAATLDWV PSGAWADDAN TLRVPSYTLL GLQAGYDFRN GLSLFVDARN LTNKRYVSDI STVADARTAN TAIFYPGEGR SVFAGMRYAF
|
| |