| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2600 |
|---|
| Symbol | |
|---|
| ID | 3754367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 2955623 |
|---|
| End bp | 2957944 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637767448 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_373355 |
|---|
| Protein GI | 78063447 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.637909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGGA AAAAACTAAT CGTCACCGCG CTGGGGGGAC TGCTGACGGG CGGGGCCGTA
TCGTTGCCCG CATGGGCGGA AGAGGGCGCG GTGACGGCGG CGCCGGACGC GAAGCCGGCG
CAACCGGGCG CGGACGATGC AGCCGCGGCC GCACCGGCGG CAGCCCGTGC ATCCCGTGTG
AGCCGCGGCA CGGCGACACG CGAAACGAAC CTCGGCACGG TGACGGTGAC CGCGCGCCGG
CGCAAGGAGA GCATCCAGGA TGTGCCGGTC GCGGTGAGCG CGTTGAGCGG CGACACGATC
AGGAACAACG AGCTGCGCGT GGTCAACGAC GTCACGAAGT ACGTGCCGAA CTTCACCGGG
CAATCGACCG AAGGCCGCGA GCGGCCGCGC TGGTTCATGC GCGGCGTCGG CAGCAACGAT
CCGTCGGACC TGTCGCTGAG CCCGATCGGC GTGTACTTCG ACGACGTCTA CATCAACAGC
GTGTTCGGGC AGGGCTTCCC GTTGTTCGAC CTCGATCGCA TCGAAGTGCT GCGCGGCCCG
CAGGGCACGC TGTGGGGCAA GAATACCGTC GGCGGCGCGC TCAGCATCAC GTCGCAGAAG
CCGACCTTCG ACGTGAGCGG CTACGGCAAG ATCGGGCTCG GCCAGTACAA CAGCCGGCTC
GCGGAAGCCG CGATCGGCGG CCCGATCGGC AAGAACGACG TGCTGGCTGC ACGCGTGTCG
GTGTATCACG AGAACGCCGA CAGCTTCTAC ACGAATACCG TGCAGCAAGG GCGTTTCGGC
GGCTTCCACG ACAATGCGGT GCGCTTCCAG GTGCTCGCCG TGCCGACCTC GGATACCGAC
TTCCTGTTCA ACATCCACGG CCGCAACTAC ACAGGCGGCG GCAATGCGTG GCACGCGCAG
GGCGCGGGGA CGGGCGGCGC GAACCAGTTC GGCTTCGTCG GGTCGAGCGA TCCGTACACG
GTGTCGCTCA ACGCGCCGTC GAGCGATCAC ATCTCGACCT GGGGCACGTC GCTTACCGCG
CACTGGCGCA TCAACCCGGC GGTGACGCTG ACGTCGATCA CCGCGTTCGA AGGGCTACAC
CGCTGGTACC AGGACGACGA GGACTATTCC GCGTTCGACG CCGCGCGCTC GCACGATCGC
TTGTCGAGCC GCCAGTTCTC GCAGGAATTC CGGCTCGAAT CGCCGCAGAA CGACCGGTTC
AGCTGGCTCG TCGGCACGCA CCTGTTCACC GAGCAACTGG CCGAGCAGGG GGCCGGCGGC
GGCCTGCCGG GCTCGCCGTC GCCCGCGTTC TACCACTTGA CCGACCTCAC GCAGCACACG
CAGAGCGCGG CGATCTTCGG CAGCGTGAAG TACCGGTTCA CCGACCGCTT CAACGTGACG
GGCGGGCTGC GTTACACGAT CGAGCGCAAG AACATCAACC TGACCGGGTT GCAGGACACC
GGCAACGTGA CGTTCAGCAA TCCGGGCAGC TGGTGGGATC CGTCGTCGGT GTCGTCGCCG
CTGGCGGTCA GCGCGCGGCA GAACCAGACG AACACGTGGC GCGCGCCGAC CTGGGACCTC
ACGCCCGAAT ATGCGCTCAG CAGCAACGTG CGCGCGTATT TCCGCTATGC GCGCGGCTTC
CGGTCGGGTG GTTACAACGG CAATGCGTAT ACGCAGAGCA CGATATCGAC CGTGTCGCCG
GAGTACCTGA CCGACTACGA AGTCGGCATC AAGAGCGAGT GGTTCGACAA GCGGCTGATC
GTCAACGCGA GCGTGTTCCA CTACGACTAT CGCGACATCC AGGTGTTCGC GCTGGCGCCG
AACCCGTTCG GCGGGCCGCC GGTGTCGACG CTGTCGAACG CGGGGCAGGG GCGCGCGGAC
GGCTTCGAGC TGGAGCTGAA GGCGCAGCCG GTCAACAGCC TCTACCTGTT CGCGAACCTC
GGGATGCTGA ACACGCGCTA CACGGAGTTC CGCTACGTGC CGACCGCCGT CGGCAACTCG
TTCGCGCGTT CGCCGCATAC GACGATCAAC GCGGGCTTCG ACTATCGCGT GCCGGTGTCG
TTCGGCACGC TGACGGCCGG CGGCGACGTG AATTACCGCA GCCGCGAGTA CTTCAGCGCG
ACGCGGCAGA CGATGCCGCA GCTCTGGCAG GGCGGCTACA CGGTGCTGAA CGCGCACGTG
TCCTACACGA CGCCGAACCA GAAGTACATC GTGACGGGCT ATGTGACGAA CCTGACCAAC
AAGGTCTACA AGAAGCTCGA GCTGCTGCCG TCGTATGGCG CGTATCCGGT GCTGTACGGC
GATCCGCGCA CGGTCGGGAT CACGCTCACG GCGAAGATCT GA
|
|---|
| Protein sequence | MFRKKLIVTA LGGLLTGGAV SLPAWAEEGA VTAAPDAKPA QPGADDAAAA APAAARASRV
SRGTATRETN LGTVTVTARR RKESIQDVPV AVSALSGDTI RNNELRVVND VTKYVPNFTG
QSTEGRERPR WFMRGVGSND PSDLSLSPIG VYFDDVYINS VFGQGFPLFD LDRIEVLRGP
QGTLWGKNTV GGALSITSQK PTFDVSGYGK IGLGQYNSRL AEAAIGGPIG KNDVLAARVS
VYHENADSFY TNTVQQGRFG GFHDNAVRFQ VLAVPTSDTD FLFNIHGRNY TGGGNAWHAQ
GAGTGGANQF GFVGSSDPYT VSLNAPSSDH ISTWGTSLTA HWRINPAVTL TSITAFEGLH
RWYQDDEDYS AFDAARSHDR LSSRQFSQEF RLESPQNDRF SWLVGTHLFT EQLAEQGAGG
GLPGSPSPAF YHLTDLTQHT QSAAIFGSVK YRFTDRFNVT GGLRYTIERK NINLTGLQDT
GNVTFSNPGS WWDPSSVSSP LAVSARQNQT NTWRAPTWDL TPEYALSSNV RAYFRYARGF
RSGGYNGNAY TQSTISTVSP EYLTDYEVGI KSEWFDKRLI VNASVFHYDY RDIQVFALAP
NPFGGPPVST LSNAGQGRAD GFELELKAQP VNSLYLFANL GMLNTRYTEF RYVPTAVGNS
FARSPHTTIN AGFDYRVPVS FGTLTAGGDV NYRSREYFSA TRQTMPQLWQ GGYTVLNAHV
SYTTPNQKYI VTGYVTNLTN KVYKKLELLP SYGAYPVLYG DPRTVGITLT AKI
|
|---|
| |