| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1914 |
|---|
| Symbol | |
|---|
| ID | 3753679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 2189928 |
|---|
| End bp | 2191613 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637766763 |
|---|
| Product | 2,3-dimethylmalate lyase |
|---|
| Protein accession | YP_372672 |
|---|
| Protein GI | 78062764 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1213] Predicted sugar nucleotidyltransferases
[COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02320] phosphoenolpyruvate phosphomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC GCGAACCCAA TTTCACCGAA TCGCGCAGCG CACGCCTGCG CCGCATGCTC
GTCAGCAGCG ACCTCGAATT CCTGATGGAA GCGCACAACG GCCTGTCCGC GCGGATCGTC
CGCGAAGCCG GCTTCAAGGG CATCTGGGCA TCGGGCCTCG CGATCTCCGC GCAGTTCGGC
GTGCGTGACA ACAACGAAGC CAGCTGGACC CAGGTGGTCG ACGTGCTCGA ATTCATGGCC
GACGCGAGCG ATCTGCCGAT CCTGCTCGAC GGCGACACCG GCTACGGCAA CTTCAACAAC
GTGCGCCGCC TTGTGAAGAA GCTCGAGCAG CGCGGCATCG CCGGCGTCTG CATCGAGGAC
AAGCAGTTCC CGAAGACCAA CAGCTTCATC GGCGGCGAGC GCCAGCCGCT CGCCGAAATC
GACGAGTTCT GCGGCAAGAT CAAGGCCGGC AAGGATTCGC AGACCGATCC CGACTTCTCG
ATCGTCGCGC GTGTCGAAGC GCTGATCGCC GGCTGGGGGA TGGACGAGGC ACTGCGCCGC
GCGAACGCGT ATGCGGAAGC CGGCGCGGAC GCGATCCTGA TCCACAGCAA GCTGTCGCGC
CCGGACGAGA TCCTGCAGTT CGCGCGTGAA TGGAGCGGCA AGGCGCCGCT CGTGATCGTG
CCGACCAAGT ACTACAGCAC GCCGACCGAC GTGTTCCGCC AGGCCGGCAT CAGCACCGTG
ATCTGGGCGA ACCACCTGAT CCGCGCGTCG GCATCCGCGA TGCAGGCGAC TGCACGCGAG
ATCCACGAAA GCGAAACGCT GATCAACGTC GAAGACCGCG TTGCATCGGT CAACGAGATC
TTCCGCCTGC AGGACGCCGA CGAGTACTCG GCGGCCGAGC GTATCTACCT GTCGTCGTCG
TCGCGCGCGT CGAACGCGGC GATCGTGCTG GCAGCCAGCC GCGGCAAGGG CCTCGAAGCC
GTGACCGAAG ACAAGCCGAA GGTCATGCTG CCGGTCGCCG GCAAGCCGCT GCTGCGCTGG
CTCGTCGACG GCTTCAAGAC GCACGGCGTG AACGACATCA CCGTGGTCGG CGGCTATCGC
GCCGACGCGA TCGACACGTC GGGCGTCAAG CTCGTCGTCA ACGAACGCCA TGCACAGACG
GGCGAGCTCG CATCGCTCGC GTGCGCGGCC GAACGCCTGA CCGGCGACAC CGTGATCTCG
TACGGCGACC TGCTGTTCCG CAGCTACATC GTGCGCGACC TCGCAGAGAG CGAGGCCGAG
TTCAGCGTGG TGGTCGATTC GTCGCTGACG GAGACCAACC AGAGCGTGCG CGATTTCGCA
CTCTGCTCGG CGGAAGACGA TCGCGGCCTG TTCGGCCAGA AGACCTACCT GCAACGCGTC
TCGAGCGACG TCGCCGCAGG CACGCCGCAC GGCCGCTGGA TCGGCCTGCT GAACGTGCGT
GGCGCCGGCG TCGACCGCCT GAAGGCGATG CTCGCGACGC TGCAGGCGCG TCCTGATTTC
GACACGCTCG ACATCCCGTC GCTGCTCAAC GAACTGATCG CCGCCGGCGA GAAGATCGAG
GTGCAGTACG TGCACGGCCA CTGGCGCGGC GTCAACGATC TCGAAGACTT CCGCCGCGCG
GGCGACTTCG CGCACGGTCA AACGCCGCTG TCCGAACCGG GTGCCGGCAA CGGGGGCGCG
CAATGA
|
|---|
| Protein sequence | MNAREPNFTE SRSARLRRML VSSDLEFLME AHNGLSARIV REAGFKGIWA SGLAISAQFG
VRDNNEASWT QVVDVLEFMA DASDLPILLD GDTGYGNFNN VRRLVKKLEQ RGIAGVCIED
KQFPKTNSFI GGERQPLAEI DEFCGKIKAG KDSQTDPDFS IVARVEALIA GWGMDEALRR
ANAYAEAGAD AILIHSKLSR PDEILQFARE WSGKAPLVIV PTKYYSTPTD VFRQAGISTV
IWANHLIRAS ASAMQATARE IHESETLINV EDRVASVNEI FRLQDADEYS AAERIYLSSS
SRASNAAIVL AASRGKGLEA VTEDKPKVML PVAGKPLLRW LVDGFKTHGV NDITVVGGYR
ADAIDTSGVK LVVNERHAQT GELASLACAA ERLTGDTVIS YGDLLFRSYI VRDLAESEAE
FSVVVDSSLT ETNQSVRDFA LCSAEDDRGL FGQKTYLQRV SSDVAAGTPH GRWIGLLNVR
GAGVDRLKAM LATLQARPDF DTLDIPSLLN ELIAAGEKIE VQYVHGHWRG VNDLEDFRRA
GDFAHGQTPL SEPGAGNGGA Q
|
|---|
| |